Parental gene:

UBE2V2, ENSCAFG00000028827

Aliases:None
Description:Canis lupus familiaris ubiquitin-conjugating enzyme E2 variant 2 (UBE2V2), mRNA. [Source:RefSeq mRNA;Acc:NM_001205115]
Organism:Dog (Canis familiaris)
Coordinates:29:307524..357962(+)


>ENSCAFG00000028827
ATGGCGGTCTCCACAGGCGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAAAAGGAGTAGG
CGATGGTACGGTTAGCTGGGGCCTTGAAGATGATGAAGATATGACACTTACAAGGTGGACAGGCATGATTATTGGGCCAC
CAAGGACAAATTATGAAAACAGAATATATAGCCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTCCTCCATCAGTT
AGATTTGTAACCAAAATTAATATGAATGGAATTAATAATTCCAGTGGAATGGTGGATGCACGGAGCATACCAGTGTTAGC
TAAATGGCAAAATTCATATAGCATTAAAGTTGTACTTCAAGAGCTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGC
TTCCACAGCCACCAGAAGGACAAACATACAACAATTAA

Library Parental gene expression (RPM)
SRP017611_brain 44 .54 RPM
SRP017611_kidney 37 .71 RPM
SRP017611_liver 12 .76 RPM
SRP012049_cerebellum 48 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032244 within_species_paralog 8 retrogenes
retro_cfam_1005, retro_cfam_1066, retro_cfam_1299, retro_cfam_1340, retro_cfam_1499, retro_cfam_2186, retro_cfam_494, retro_cfam_604,
Cavia porcellus ENSCPOG00000014413 ortholog_one2one 4 retrogenes
retro_cpor_1277, retro_cpor_540, retro_cpor_751, retro_cpor_849,
Felis catus ENSFCAG00000007602 ortholog_one2one 6 retrogenes
retro_fcat_1169, retro_fcat_1256, retro_fcat_141, retro_fcat_15, retro_fcat_1678, retro_fcat_1868,
Macropus eugenii ENSMEUG00000016581 ortholog_one2one 1 retrogene
retro_meug_2093,
Myotis lucifugus ENSMLUG00000002057 ortholog_one2one 6 retrogenes
retro_mluc_1077, retro_mluc_2371, retro_mluc_386, retro_mluc_559, retro_mluc_659, retro_mluc_985,
Macaca mulatta ENSMMUG00000008223 ortholog_one2one 1 retrogene
retro_mmul_1066,
Monodelphis domestica ENSMODG00000010191 ortholog_one2many 10 retrogenes
retro_mdom_1065, retro_mdom_1151, retro_mdom_1167, retro_mdom_1435, retro_mdom_1660, retro_mdom_173, retro_mdom_1979, retro_mdom_736, retro_mdom_786, retro_mdom_979,
Mustela putorius furo ENSMPUG00000001010 ortholog_one2one 2 retrogenes
retro_mputfur_460, retro_mputfur_979,
Oryctolagus cuniculus ENSOCUG00000006933 ortholog_one2one 1 retrogene
retro_ocun_5,
Tupaia belangeri ENSTBEG00000015720 ortholog_one2one 27 retrogenes
retro_tbel_1333, retro_tbel_1456, retro_tbel_1479, retro_tbel_1551, retro_tbel_160, retro_tbel_1740, retro_tbel_1784, retro_tbel_2129, retro_tbel_2149, retro_tbel_2317, retro_tbel_2334, retro_tbel_2496, retro_tbel_2890, retro_tbel_2935, retro_tbel_3021, retro_tbel_3102, retro_tbel_3141, retro_tbel_3461, retro_tbel_3573, retro_tbel_3734, retro_tbel_3935, retro_tbel_3971, retro_tbel_4227, retro_tbel_4319, retro_tbel_4720, retro_tbel_640, retro_tbel_909,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1223 97.24 100.00
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Download FASTA sequences of all ENSCAFG00000028827 retrocopies