Parental gene:

NIPSNAP3A, ENSCAFG00000023949

Aliases:None
Description:nipsnap homolog 3A (C. elegans) [Source:HGNC Symbol;Acc:23619]
Organism:Dog (Canis familiaris)
Coordinates:11:60715162..60757248(+)


>ENSCAFG00000023949
ATGCTCGTCCTCCGAAGCCGCCTGGCTGCGGCTCTGGCTGCGCGGACGCTCGCGCCTCAGGTTTGCTCATCTTTTGCTAC
AGGCCCCAGACAATATGATGGAACATTCTATGAATTCCGTACTTATTATCTTAAGCCCTCAAAAATGAATGAGTTCCTGG
AAAATACTAAGAAAAACATTCATCTTCGGACAGCTCACTCTGAATTGGTTGGATACTGGAGTGTAGAATTTGGAGGCAGA
ATGAATAAAGTGTTTCATATTTGGAAGTATGATAATTTTGCTCATCGAACTGAAGTTCGGAAAGCATTGGCCAAAGATAA
AGAATGGCAAGAACAATACCTGATTCCAAATTTGGCTCTAATTGATAAACAAGAGAGTGAGATTACTTATCTGGTGCCAT
GGAGCAAATTAGAAGAGCCTCCAAAAGAAGGAATCTATGAACTAGCTACTTTTCAGATGAAACCTGGTGGGCCAGCTCTG
TGGGGTGACCCGTTTAAAAGAGCAGTTCATACTCATGTCAATCGAGGCTATACAAAACTAGTTGGAGTGTTCCATGCAGA
ATATGGAGTGCTCAACAGAGTTCATGTTCTTTGGTGGAATGAGAGTGCAGACAGTCGTGCAGCTGGGAGACATCAGTCTC
ATGAGGATCCCAGGGTTGTGGCAGCCGTTCGAGAAAGTGTTCACTTCCTCGAGTCTCAGCAGAATATGCTTCTGATTCCT
ACATCATTTTCACCTTTGAAATAG

Library Parental gene expression (RPM)
SRP017611_brain 15 .64 RPM
SRP017611_kidney 25 .03 RPM
SRP017611_liver 29 .22 RPM
SRP012049_cerebellum 26 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014253 possible_ortholog 1 retrogene
retro_acar_133,
Cavia porcellus ENSCPOG00000009373 ortholog_one2one 1 retrogene
retro_cpor_690,
Dasypus novemcinctus ENSDNOG00000000943 ortholog_one2one 1 retrogene
retro_dnov_482,
Echinops telfairi ENSETEG00000016120 ortholog_one2one 1 retrogene
retro_etel_1335,
Myotis lucifugus ENSMLUG00000010147 ortholog_one2one 1 retrogene
retro_mluc_924,
Oryctolagus cuniculus ENSOCUG00000007880 ortholog_one2one 1 retrogene
retro_ocun_1385,
Tursiops truncatus ENSTTRG00000012307 ortholog_one2one 1 retrogene
retro_ttru_1702,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_295 56.36 92.71
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Download FASTA sequences of all ENSCAFG00000023949 retrocopies