Parental gene:

RABGGTB, ENSCAFG00000020392

Aliases:None
Description:Rab geranylgeranyltransferase, beta subunit [Source:HGNC Symbol;Acc:9796]
Organism:Dog (Canis familiaris)
Coordinates:6:70825256..70833471(-)


>ENSCAFG00000020392
AAGGGCACACCGCAGAAGGATGTTATCATCAAGTCAGATGCACCTGACACACTGCTGTTAGAGAAGCATGCGGATTATAT
CGCGTCCTATGGCTCCAAGAAAGATGATTATGAATACTGTATGTCTGAATATTTGAGAATGAGTGGGATCTATTGGGGTC
TGACTGTGATGGATCTGATGGGACAACTACATCGGATGAATAGAGAAGAAATTCTGACCTTCATTAAGTCATGTCAACAT
GAGTGTGGTGGAATAAGTGCTAGTATTGGACATGACCCCCATCTTTTGTACACTCTAAGTGCTGTCCAGATTCTTACTCT
GTATGATAGTATTAATGTTATTGATGTAAATAAAGTTGTGGAATATGTTCAGAGTCTACAGAAAGAAGATGGTTCTTTTG
CTGGAGATATATGGGGAGAAATAGATACAAGATTCTCTTTTTGTGCGGTGGCAACCTTGGCTCTGTTGGGGAAGCTAGAC
GCTATTAATGTGGAAAAGGCAATTGAATTTGTTTTATCGTGTATGAACTTTGATGGTGGATTTGGTTGCAGGCCAGGTTC
TGAATCCCATGCTGGGCAGATCTATTGTTGCACAGGATTTCTGGCTATTACTAGCCAGTTGCATCAAGTAAATTCTGATT
TACTCGGTTGGTGGCTTTGTGAACGACAGTTACCATCAGGTGGACTCAATGGAAGGCCCGAGAAGTTACCAGATGTCTGC
TATTCGTGGTGGGTGTTGGCTTCCCTAAAGATAATTGGAAGGCTTCATTGGATTGATAGAGAGAAACTGCGAAGTTTCAT
TTTAGCATGTCAAGATGAAGAAACAGGAGGATTTGCAGACCGACCAGGAGACATGGTAGATCCTTTTCATACTTTATTTG
GAATTGCTGGATTGTCACTTTTGGGAGAAGAACAGATTAAACCTGTTAGTCCTGTTTTTTGCATGCCTGAAGAAGTGCTT
CGGAGAGTCAATGTTCAGCCTGAACTAGTGAGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 29 .30 RPM
SRP017611_kidney 97 .21 RPM
SRP017611_liver 37 .92 RPM
SRP012049_cerebellum 31 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011052 ortholog_one2one 1 retrogene
retro_acar_155,
Choloepus hoffmanni ENSCHOG00000009456 ortholog_one2one 2 retrogenes
retro_chof_1851, retro_chof_260,
Mus musculus ENSMUSG00000038975 ortholog_one2one 1 retrogene
retro_mmus_1030,
Otolemur garnettii ENSOGAG00000007665 ortholog_one2one 1 retrogene
retro_ogar_1089,
Sorex araneus ENSSARG00000007392 ortholog_one2one 1 retrogene
retro_sara_207,
Ictidomys tridecemlineatus ENSSTOG00000021824 ortholog_one2one 1 retrogene
retro_itri_484,
Tursiops truncatus ENSTTRG00000014126 ortholog_one2one 3 retrogenes
retro_ttru_1391, retro_ttru_1767, retro_ttru_214,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2104 91.84 99.70
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Download FASTA sequences of all ENSCAFG00000020392 retrocopies