Parental gene: | Rabggtb, ENSMUSG00000038975 |
| Aliases: | None |
| Description: | RAB geranylgeranyl transferase, b subunit [Source:MGI Symbol;Acc:MGI:99537] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:153907288..153912966(-) |
>ENSMUSG00000038975
ATGGGATCTCTGCTTTTTTCTTGGAAGGGCACACAGCAGAAAGACGTTACTATCAAGTCAGATGCGCCTGACACCCTGTT
GCTGGAGAAGCATGCCGATTATATTGCTTCCTATGGCTCAAAGAAAGATGATTATGAATACTGCATGTCTGAATACCTGA
GAATGAGCGGCGTCTATTGGGGCCTGACTGTGATGGACCTCATGGGACAGCTTCATCGCATGAACCGAGAAGAAATCCTG
GTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGGAATAAGTGCTAGCATTGGGCACGACCCCCACCTTCTGTACACGCT
CAGTGCTGTCCAGATTCTTACTCTGTATGACAGTGTTCATGTTATCAACGTAGATAAGGTCGTGGCCTATGTTCAGAGCC
TACAGAAAGAAGATGGCTCCTTTGCTGGAGACATTTGGGGAGAAATTGATACAAGATTCTCATTTTGTGCGGTGGCAACT
TTGGCTCTTTTGGGCAAGCTTGATGCTATTAATGTGGAAAAGGCGATTGAGTTTGTTTTGTCCTGCATGAACTTTGATGG
TGGATTTGGGTGCAGACCAGGCTCTGAATCTCACGCTGGGCAGATCTATTGTTGCACAGGATTCCTGGCCATAACTAGTC
AGTTGCACCAAGTGAACTCCGACCTACTTGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGA
CCCGAGAAGTTACCAGATGTGTGCTATTCATGGTGGGTGTTGGCCTCCCTAAAGATCATCGGGAGACTTCATTGGATTGA
CAGAGAAAAGCTTCGAAGTTTCATCTTAGCGTGTCAAGATGAAGAGACGGGAGGATTTGCAGACAGACCAGGAGATATGG
TGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTC
TTCTGTATGCCAGAAGAGGTGCTTCAGAGGGTGAATGTCCAGCCTGAGCTAGTGAGCTAG
ATGGGATCTCTGCTTTTTTCTTGGAAGGGCACACAGCAGAAAGACGTTACTATCAAGTCAGATGCGCCTGACACCCTGTT
GCTGGAGAAGCATGCCGATTATATTGCTTCCTATGGCTCAAAGAAAGATGATTATGAATACTGCATGTCTGAATACCTGA
GAATGAGCGGCGTCTATTGGGGCCTGACTGTGATGGACCTCATGGGACAGCTTCATCGCATGAACCGAGAAGAAATCCTG
GTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGGAATAAGTGCTAGCATTGGGCACGACCCCCACCTTCTGTACACGCT
CAGTGCTGTCCAGATTCTTACTCTGTATGACAGTGTTCATGTTATCAACGTAGATAAGGTCGTGGCCTATGTTCAGAGCC
TACAGAAAGAAGATGGCTCCTTTGCTGGAGACATTTGGGGAGAAATTGATACAAGATTCTCATTTTGTGCGGTGGCAACT
TTGGCTCTTTTGGGCAAGCTTGATGCTATTAATGTGGAAAAGGCGATTGAGTTTGTTTTGTCCTGCATGAACTTTGATGG
TGGATTTGGGTGCAGACCAGGCTCTGAATCTCACGCTGGGCAGATCTATTGTTGCACAGGATTCCTGGCCATAACTAGTC
AGTTGCACCAAGTGAACTCCGACCTACTTGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGA
CCCGAGAAGTTACCAGATGTGTGCTATTCATGGTGGGTGTTGGCCTCCCTAAAGATCATCGGGAGACTTCATTGGATTGA
CAGAGAAAAGCTTCGAAGTTTCATCTTAGCGTGTCAAGATGAAGAGACGGGAGGATTTGCAGACAGACCAGGAGATATGG
TGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTC
TTCTGTATGCCAGAAGAGGTGCTTCAGAGGGTGAATGTCCAGCCTGAGCTAGTGAGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 36 .91 RPM |
| SRP007412_cerebellum | 46 .03 RPM |
| SRP007412_heart | 48 .16 RPM |
| SRP007412_kidney | 52 .34 RPM |
| SRP007412_liver | 31 .08 RPM |
| SRP007412_testis | 7 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000011052 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000020392 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009456 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007665 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007392 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021824 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014126 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1030 | 57.59 | 55.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000038975 retrocopies