Parental gene: | MAPK3, ENSCAFG00000017108 |
| Aliases: | None |
| Description: | mitogen-activated protein kinase 3 [Source:HGNC Symbol;Acc:6877] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:18110621..18115188(-) |
>ENSCAFG00000017108
TGGGGGGACCCTGGGGACTCTGTGGACGCGGGAGGAGGCGGAGACACGAAGTATTCTTGGGGAGGTGATATCAGTGAGGA
CCGAGTGAAGGACCCTACTCTGGGGAAAGGATGCCTTGGATTCTCCCACTCAGCTTACGACCACGTGCGCAAGGTTCGCG
TGGCCATCAAGAAAATCAGCCCCTTTGAGCATCAGACCTACTGCCAGCGCACACTGAGGGAGATCCAGATCTTGCTGCGC
TTCCGCCATGAGAACGTCATTGGCATTCGGGACATTCTGCGGGCGCCCACCCTGGACGCCATGAGGGATGTCTACATCGT
GCAGGACCTGATGGAGACAGACCTATACAAGTTGCTCAAAAGCCAGCAGCTGAGCAACGACCATGTTTGCTACTTCCTCT
ACCAGATCCTGCGAGGTCTCAAGTATATCCACTCAGCCAATGTGCTCCACCGGGATTTAAAGCCCTCTAACCTGCTCATC
AACACCACCTGTGACCTTAAGATCTGCGATTTTGGCCTGGCCCGGATTGCCGATCCTGAGCATGACCACACTGGCTTCCT
GACAGAATATGTGGCCACGCGCTGGTACCGGGCTCCAGAAATCATGCTTAACTCTAAGGGCTACACCAAGTCCATCGACA
TCTGGTCTGTGGGCTGCATTCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCCCTGGCAAGCACTACCTGGACCAGCTC
AACCACATTCTAGGTATCCTAGGCTCTCCATCCCAGGAGGACTTGAACTGTATCATCAATATGAAGGCCCGAAACTACCT
ACAGTCTCTGCCCTCCAAGACCAAGGTGGCATGGGCCAAGCTTTTTCCCAAGTCAGACTCCAAAGCCCTTGACCTGCTAG
ACCGGATGTTGACCTTTAACCCCAACAAACGGATTACAGTGGAAGAAGCACTGGCTCATCCCTACTTGGAGCAGTACTAC
GACCCAACAGATGAGCCAGTGGCTGAGGAGCCTTTCACTTTCGACATGGAGCTGGATGATCTACCCAAGGAGCGTCTGAA
GGAGCTCATCTTCCAGGAGACAGCCCGCTTCCAGCCTGGGGTG
TGGGGGGACCCTGGGGACTCTGTGGACGCGGGAGGAGGCGGAGACACGAAGTATTCTTGGGGAGGTGATATCAGTGAGGA
CCGAGTGAAGGACCCTACTCTGGGGAAAGGATGCCTTGGATTCTCCCACTCAGCTTACGACCACGTGCGCAAGGTTCGCG
TGGCCATCAAGAAAATCAGCCCCTTTGAGCATCAGACCTACTGCCAGCGCACACTGAGGGAGATCCAGATCTTGCTGCGC
TTCCGCCATGAGAACGTCATTGGCATTCGGGACATTCTGCGGGCGCCCACCCTGGACGCCATGAGGGATGTCTACATCGT
GCAGGACCTGATGGAGACAGACCTATACAAGTTGCTCAAAAGCCAGCAGCTGAGCAACGACCATGTTTGCTACTTCCTCT
ACCAGATCCTGCGAGGTCTCAAGTATATCCACTCAGCCAATGTGCTCCACCGGGATTTAAAGCCCTCTAACCTGCTCATC
AACACCACCTGTGACCTTAAGATCTGCGATTTTGGCCTGGCCCGGATTGCCGATCCTGAGCATGACCACACTGGCTTCCT
GACAGAATATGTGGCCACGCGCTGGTACCGGGCTCCAGAAATCATGCTTAACTCTAAGGGCTACACCAAGTCCATCGACA
TCTGGTCTGTGGGCTGCATTCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCCCTGGCAAGCACTACCTGGACCAGCTC
AACCACATTCTAGGTATCCTAGGCTCTCCATCCCAGGAGGACTTGAACTGTATCATCAATATGAAGGCCCGAAACTACCT
ACAGTCTCTGCCCTCCAAGACCAAGGTGGCATGGGCCAAGCTTTTTCCCAAGTCAGACTCCAAAGCCCTTGACCTGCTAG
ACCGGATGTTGACCTTTAACCCCAACAAACGGATTACAGTGGAAGAAGCACTGGCTCATCCCTACTTGGAGCAGTACTAC
GACCCAACAGATGAGCCAGTGGCTGAGGAGCCTTTCACTTTCGACATGGAGCTGGATGATCTACCCAAGGAGCGTCTGAA
GGAGCTCATCTTCCAGGAGACAGCCCGCTTCCAGCCTGGGGTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 28 .82 RPM |
| SRP017611_kidney | 9 .05 RPM |
| SRP017611_liver | 2 .83 RPM |
| SRP012049_cerebellum | 17 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000002191 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000017904 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011284 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000063065 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007239 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019601 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1254 | 97.56 | 90.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000017108 retrocopies