Parental gene:

PSMB6, ENSCAFG00000015855

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 6 [Source:HGNC Symbol;Acc:9543]
Organism:Dog (Canis familiaris)
Coordinates:5:31776234..31778833(-)


>ENSCAFG00000015855
ATGGCGGCCACCTTGCTAACCGCTCGAGGAGCGGAGTCCGCGCCGGCCTGGGGTGCCGAGGCCATCACCCCGGACTGGGA
GAGCCGGGAAGTCTCCACAGGGACCACCATCATGGCCGTGCAATTTGAAGGGGGCGTGGTTCTGGGAGCCGACTCCAGAA
CAACCACTGGGTCCTACATTGCCAATCGAGTGACAGACAAGCTGACCCCTATTCATGACCGGATTTTCTGCTGCCGCTCA
GGCTCAGCAGCTGACACCCAGGCCGTAGCCGATGCGGTCACTTATCAGCTTGGTTTCCACAGCATTGAGCTAAATGAGCC
TCCACTGGTACACACAGCAGCCAGCCTCTTTAAGGAGATGTGTTACCGATACCGGGAGGACCTGATGGCAGGAATCATCA
TTGCGGGCTGGGACCCCCAAGAGGGAGGGCAGGTGTACTCGGTGCCCATGGGGGGTATGATGGTAAGGCAGTCCTTTGCC
ATTGGGGGCTCTGGGAGCTCCTACATATATGGCTATGTCGATGCTACCTACCGGGAAGGCATGACCAAGGAGGAGTGTCT
GCAGTTCACTGCCAATGCGCTCGCTTTGGCCATGGAACGGGACGGCTCCAGCGGAGGGGTGATCCGCCTGGCGGCCATTG
CAGAATCAGGGGTAGAGCGGCAGGTACTTTTGGGAGACCAGATTCCCAAATTCACCATCGCCACTTTGCCACCTCCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 30 .25 RPM
SRP017611_kidney 83 .54 RPM
SRP017611_liver 27 .56 RPM
SRP012049_cerebellum 58 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016075 ortholog_one2one 1 retrogene
retro_amel_1834,
Callithrix jacchus ENSCJAG00000012010 ortholog_one2one 1 retrogene
retro_cjac_775,
Loxodonta africana ENSLAFG00000012859 ortholog_one2one 1 retrogene
retro_lafr_874,
Macropus eugenii ENSMEUG00000010676 ortholog_one2one 1 retrogene
retro_meug_621,
Microcebus murinus ENSMICG00000014854 ortholog_one2one 2 retrogenes
retro_mmur_140, retro_mmur_718,
Monodelphis domestica ENSMODG00000005554 ortholog_one2many 1 retrogene
retro_mdom_799,
Mus musculus ENSMUSG00000018286 ortholog_one2one 2 retrogenes
retro_mmus_348, retro_mmus_3569,
Rattus norvegicus ENSRNOG00000019551 ortholog_one2many 1 retrogene
retro_rnor_56,
Sorex araneus ENSSARG00000006615 ortholog_one2one 1 retrogene
retro_sara_689,
Tursiops truncatus ENSTTRG00000000566 ortholog_one2one 1 retrogene
retro_ttru_405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2173 69.75 98.33
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Download FASTA sequences of all ENSCAFG00000015855 retrocopies