Parental gene: | ENSCAFG00000009857 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 35:13206745..13221665(-) |
>ENSCAFG00000009857
GAGCTAAGCCTTTCTGCTGGGAGCCTGCAGCTGGAGCACAGAAGAGATTTGGAGCACAAGAAGAGAGATTTCACCTCCTG
CGGGAACAAGAAGCTCTACTTTGACACTCATGCCTTAGTTTGTTTATTGGAAGAAAATGGGTTCACTACTCAGCAAGCAG
AAATCACTGTCTCTGCATTGGTCAAGATCACGGATGCCAACATGGATATCGTCTACAAGGATATGGTCACCAAAATGCAG
CAGGAGGTCACTGTTCAGCAAATAATGTCTCAGATTGCTAATGTGAAAAAAGATATGATTATTTTGGAGAAGAGCGAATT
TTCAGCCCTCAGAGCAGAAAATGAGAAGATAAACGTGGAACTACATCGATTAAAACAACAAATAATGGATGAAGTGATCA
AAGTCCGAACAGATACCAAGTTAGACTTCAATCTAGAAAAGAGCAGAGTGAAGGAATTGTACTCATTGAATGAAAGGAAG
CTGCTGGAAATGAGGACAGAAATGGTGGCATTGCATGCCCAGCAAGATCGGGCGGTCACCCAAACAGACAGGAAGATAGA
CACTGAGGTTGCTGGCCTCAAAACCATGCTGGAGTCACACAAGCTTGATAACATTAAATATTTAGCAGGGTCTGTATTCA
CGTGCCTAACAGTAGCTCTGGGATTTTACCGCCTGTGGATA
GAGCTAAGCCTTTCTGCTGGGAGCCTGCAGCTGGAGCACAGAAGAGATTTGGAGCACAAGAAGAGAGATTTCACCTCCTG
CGGGAACAAGAAGCTCTACTTTGACACTCATGCCTTAGTTTGTTTATTGGAAGAAAATGGGTTCACTACTCAGCAAGCAG
AAATCACTGTCTCTGCATTGGTCAAGATCACGGATGCCAACATGGATATCGTCTACAAGGATATGGTCACCAAAATGCAG
CAGGAGGTCACTGTTCAGCAAATAATGTCTCAGATTGCTAATGTGAAAAAAGATATGATTATTTTGGAGAAGAGCGAATT
TTCAGCCCTCAGAGCAGAAAATGAGAAGATAAACGTGGAACTACATCGATTAAAACAACAAATAATGGATGAAGTGATCA
AAGTCCGAACAGATACCAAGTTAGACTTCAATCTAGAAAAGAGCAGAGTGAAGGAATTGTACTCATTGAATGAAAGGAAG
CTGCTGGAAATGAGGACAGAAATGGTGGCATTGCATGCCCAGCAAGATCGGGCGGTCACCCAAACAGACAGGAAGATAGA
CACTGAGGTTGCTGGCCTCAAAACCATGCTGGAGTCACACAAGCTTGATAACATTAAATATTTAGCAGGGTCTGTATTCA
CGTGCCTAACAGTAGCTCTGGGATTTTACCGCCTGTGGATA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 12 .15 RPM |
| SRP017611_kidney | 63 .99 RPM |
| SRP017611_liver | 6 .60 RPM |
| SRP012049_cerebellum | 12 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000395 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016050 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000014899 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000009150 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000005972 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000050393 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002632 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003287 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000000183 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010975 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000698 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000914 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013458 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000017740 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012562 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012874 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_823 | 62.16 | 63.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1018 | 68.00 | 53.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1556 | 50.66 | 64.76 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000009857 retrocopies