Parental gene:

ENSCAFG00000007479

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:17:38599884..38657903(+)


>ENSCAFG00000007479
ATGCGCGACCGCCACCACCTTTCCGACCAAGCCCCGCCCAACCCCGCTTCTGCGCAGGCGCCGGACGCATGCGCACCGCC
TCCACTGCGGCCGCTCCCTTCTCCGGGAGTCGGGGCTCCTCTCCTTTCCCCTGCCCCGCCCAGGCGGCTGCCCGTGACCT
GCCTGGGAGCAGGGAACGGAAAGCCGGCGGGGGCCAGACGAGTTCAGTGCGCCATGGGGCTGTTTGGGAAAACCCAGGAG
AAGCCGCCCAAAGAGCTGGTCAATGAATGGTCATTGAAGATAAGAAAGGAAATGAGAGTTGTTGACAGGCAAATAAGAGA
TATCCAAAGAGAAGAAGAAAAAGTAAAACGGTCAGTGAAAGATGCTGCCAAGAAGGGTCAGAAGGACGTCTGTGTGGTCC
TAGCCAAGGAGATGATCAGGTCAAGGAAGGCTGTGAGCAAGCTCTATGCTTCCAAAGCTCACATGAACTCTGTGCTCATG
GGGATGAAGAACCAGCTGGCGGTTTTGCGAGTGGCTGGTTCCCTGCAGAAGAGCACAGAAGTGATGAAGGCCATGCAGAG
TCTTGTGAAGATCCCAGAAATCCAGGCCACCATGAGAGAACTTTCCAAAGAGATGATGAAGGCTGGCATCATAGAAGAAA
TGTTAGAGGACACTTTTGAGAGCATGGATGATCAGGAAGAAATGGAAGAAGCAGCAGAAATGGAAATTGACAAAATTCTC
TTTGAAATCACAGCAGGGGCCTTAGGCAAAGCACCTAGTAAAGTGACCGACGCCCTTCCAGAGCCCGAACCCTCAGGAGC
GATGGCTGCATCAGAAGATGAGGAGGAGGAAGAGGCTCTGGAGGCCATGCAGTCCCGTCTGGCTACACTTCGCAGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 36 .04 RPM
SRP017611_kidney 117 .68 RPM
SRP017611_liver 16 .10 RPM
SRP012049_cerebellum 45 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019406 ortholog_one2one 2 retrogenes
retro_cjac_2032, retro_cjac_2784,
Cavia porcellus ENSCPOG00000001723 ortholog_one2one 1 retrogene
retro_cpor_920,
Macropus eugenii ENSMEUG00000009111 ortholog_one2one 1 retrogene
retro_meug_178,
Microcebus murinus ENSMICG00000005492 possible_ortholog 3 retrogenes
retro_mmur_1110, retro_mmur_1396, retro_mmur_47,
Mus musculus ENSMUSG00000053119 ortholog_one2one 1 retrogene
retro_mmus_1683,
Oryctolagus cuniculus ENSOCUG00000029277 ortholog_one2one 1 retrogene
retro_ocun_1044,
Ochotona princeps ENSOPRG00000002191 ortholog_one2one 2 retrogenes
retro_opri_18, retro_opri_436,
Sorex araneus ENSSARG00000008917 possible_ortholog 1 retrogene
retro_sara_13,
Tursiops truncatus ENSTTRG00000010400 ortholog_one2one 1 retrogene
retro_ttru_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1869 72.13 61.64
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Download FASTA sequences of all ENSCAFG00000007479 retrocopies