Parental gene:

ZMAT2, ENSCAFG00000005907

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:2:35852108..35858065(+)


>ENSCAFG00000005907
ATGGCGTCGGGCAGCGGGACAAAAAACTTGGACTTTCGCCGAAAGTGGGACAAAGATGAATATGAGAAGCTCGCCGAGAA
GAGGCTCACGGAAGAGAGAGAAAAGAAGGATGGAAAACCAGTACAGCCAGTCAAACGGGAGCTTCTCCGGCATAGGGACT
ATAAAGTGGACCTGGAATCCAAGCTTGGGAAGACAATTGTCATTACCAAGACCACGCCACAATCTGAGATGGGAGGGTAT
TACTGCAATGTCTGTGATTGTGTGGTGAAGGACTCCATCAACTTCCTGGATCACATTAATGGAAAGAAACATCAGCGAAA
TCTGGGCATGTCTATGCGTGTGGAACGTTCCACCTTGGATCAGGTGAAGAAACGTTTTGAAGTCAACAAGAAGAAGATGG
AAGAGAAACAGAAGGATTATGATTTTGAGGAAAGGATGAAAGAGCTCAGAGAAGAGGAGGAAAAGGCCAAAGCCTACAAG
AAAGAGAAACAGAAGGAGAAGAAAAGGAGGGCTGAGGAGGACTTGACATTTGAGGAGGATGATGAGATGGCAGCTGTGAT
GGGCTTCTCTGGCTTTGGTTCCACCAAGAAGAGTTACTGA

Library Parental gene expression (RPM)
SRP017611_brain 28 .82 RPM
SRP017611_kidney 15 .25 RPM
SRP017611_liver 6 .82 RPM
SRP012049_cerebellum 25 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016231 ortholog_one2one 3 retrogenes
retro_cjac_1137, retro_cjac_1472, retro_cjac_4007,
Dipodomys ordii ENSDORG00000014559 ortholog_one2one 8 retrogenes
retro_dord_123, retro_dord_127, retro_dord_129, retro_dord_131, retro_dord_133, retro_dord_135, retro_dord_136, retro_dord_138,
Echinops telfairi ENSETEG00000005406 ortholog_one2many 2 retrogenes
retro_etel_156, retro_etel_882,
Ficedula albicollis ENSFALG00000008988 ortholog_one2many 1 retrogene
retro_falb_9,
Myotis lucifugus ENSMLUG00000017525 ortholog_one2one 2 retrogenes
retro_mluc_2281, retro_mluc_2309,
Monodelphis domestica ENSMODG00000011269 ortholog_one2many 1 retrogene
retro_mdom_1209,
Pteropus vampyrus ENSPVAG00000009717 ortholog_one2one 1 retrogene
retro_pvam_827,
Tursiops truncatus ENSTTRG00000001777 ortholog_one2one 4 retrogenes
retro_ttru_1889, retro_ttru_340, retro_ttru_721, retro_ttru_766,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_822 97.99 100.00
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Download FASTA sequences of all ENSCAFG00000005907 retrocopies