Parental gene: | ENSCAFG00000005665 |
| Aliases: | None |
| Description: | KRR1 small subunit processome component [Source:UniProtKB/TrEMBL;Acc:E2R869] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 15:18693176..18705595(-) |
>ENSCAFG00000005665
ATGGCGGCCTCCTCCTTCCACGGGCTGGCGCAGGCGAACGGGAGGAGTGAGTTTCGTCCGAAGCAGCCGAAGCCGGAGAA
GCGAGATGAATCTGAGCTCCTCACTGTTCCTGATGGTTGGAAGGAACCCGCTTTTTCTAAAGAGGACAATCCCAGAGGAC
TCTTGGAGGAGAGCAGTTTTGCAACTTTGTTCCCAAAATATAGAGAGGCTTACTTGAAAGAGTGCTGGCCTTTGGTACAG
AAAGCCTTGAATGAACATCACGTTAATGCAACCCTGGACCTGATCGAGGGCAGTATGACTGTTTGTACAACAAAGAAGAC
TTTTGATCCGTATATCATCATTAGGGCCAGAGACCTAATAAAACTTTTAGCAAGAAGTGTTTCATTTGAACAGGCAGTAC
GAATTCTTCAGGATGATGTTGCTTGTGACATCATTAAAATAGGTTCTTTAGTAAGAAATAAAGAAAGATTTGTAAAAAGA
AGACAACGTCTCATTGGCCCCAAAGGATCTACATTAAAGGCTTTGGAACTGTTAACAAACTGTTATATTATGGTTCAGGG
AAACACGGTTTCAGTCATTGGACCTTTTAGTGGCTTAAAAGAGGTTCGAAAAGTAGTCCTAGATACTATGAAGAATATCC
ATCCAATTTATAACATTAAAACCTTAATGATTAAACGAGAGTTGGCAAAAGATTCTGAATTAAGATCACAAAGTTGGGAA
AGATTCTTGCCACAGTTCAAGCACAAAAATGTGAATAAACGCAAGGAGCCAAAGAAGAAAACTGTCAAGAAAGAGTATAC
ACCATTCCCACCACCACAGCCAGAAAGTCAGATTGATAAAGAATTGGCTAGTGGTGAATATTTTCTGAAGGCAAGTCAAA
AGAAGCGTCAGAAAATGGAAGCCATAAAGGCTAAACAAGCAGAAGCTCTCAGTAAGAGACAAGAGGAAAGAAACAAAGCT
TTTATTCCACCTAAGGAAAAACCAGTTGTGAAACCAAAGGAAGCTTCTACTGAAAATAAAATTGATGTGGCTGCCATCAA
GGAAAAGATTAAAAAAGCAAAGAATAAGAAACTGGGAGCTCTTTCAGCTGAAGAAGTTAAGCTTAAAATGGAAGCAGATG
AAAAAAAGAAGAAGAAAAAGTAA
ATGGCGGCCTCCTCCTTCCACGGGCTGGCGCAGGCGAACGGGAGGAGTGAGTTTCGTCCGAAGCAGCCGAAGCCGGAGAA
GCGAGATGAATCTGAGCTCCTCACTGTTCCTGATGGTTGGAAGGAACCCGCTTTTTCTAAAGAGGACAATCCCAGAGGAC
TCTTGGAGGAGAGCAGTTTTGCAACTTTGTTCCCAAAATATAGAGAGGCTTACTTGAAAGAGTGCTGGCCTTTGGTACAG
AAAGCCTTGAATGAACATCACGTTAATGCAACCCTGGACCTGATCGAGGGCAGTATGACTGTTTGTACAACAAAGAAGAC
TTTTGATCCGTATATCATCATTAGGGCCAGAGACCTAATAAAACTTTTAGCAAGAAGTGTTTCATTTGAACAGGCAGTAC
GAATTCTTCAGGATGATGTTGCTTGTGACATCATTAAAATAGGTTCTTTAGTAAGAAATAAAGAAAGATTTGTAAAAAGA
AGACAACGTCTCATTGGCCCCAAAGGATCTACATTAAAGGCTTTGGAACTGTTAACAAACTGTTATATTATGGTTCAGGG
AAACACGGTTTCAGTCATTGGACCTTTTAGTGGCTTAAAAGAGGTTCGAAAAGTAGTCCTAGATACTATGAAGAATATCC
ATCCAATTTATAACATTAAAACCTTAATGATTAAACGAGAGTTGGCAAAAGATTCTGAATTAAGATCACAAAGTTGGGAA
AGATTCTTGCCACAGTTCAAGCACAAAAATGTGAATAAACGCAAGGAGCCAAAGAAGAAAACTGTCAAGAAAGAGTATAC
ACCATTCCCACCACCACAGCCAGAAAGTCAGATTGATAAAGAATTGGCTAGTGGTGAATATTTTCTGAAGGCAAGTCAAA
AGAAGCGTCAGAAAATGGAAGCCATAAAGGCTAAACAAGCAGAAGCTCTCAGTAAGAGACAAGAGGAAAGAAACAAAGCT
TTTATTCCACCTAAGGAAAAACCAGTTGTGAAACCAAAGGAAGCTTCTACTGAAAATAAAATTGATGTGGCTGCCATCAA
GGAAAAGATTAAAAAAGCAAAGAATAAGAAACTGGGAGCTCTTTCAGCTGAAGAAGTTAAGCTTAAAATGGAAGCAGATG
AAAAAAAGAAGAAGAAAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 15 .88 RPM |
| SRP017611_kidney | 19 .68 RPM |
| SRP017611_liver | 7 .40 RPM |
| SRP012049_cerebellum | 20 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006437 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009636 | ortholog_one2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000020451 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008145 | ortholog_one2many | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1091 | 88.80 | 65.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000005665 retrocopies