Parental gene: | CHN2, ENSCAFG00000003023 |
| Aliases: | None |
| Description: | chimerin 2 [Source:HGNC Symbol;Acc:1944] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 14:42217569..42513386(+) |
>ENSCAFG00000003023
ATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCCTCCGTGTCCTCCGATGCTGAAGAATACCAGCCTCCAATATGGAA
ATCATACTTGTATCAATTACAGCAAGAGGCCCCTCGTCCCAAGAGGATCATTTGTCCTGGGGAGGTGGAGAACAGACCAA
AATATTATGGAAGAGAGTTTCACGGGATCATCTCCCGGGAACAGGCAGACGAGCTTCTCGGAGGCGTGGAGGGCGCCTAC
ATTCTTAGAGAAAGTCAGCGCCAGCCAGGATGCTACACATTAGCTCTCAGATTTGGAAACCAGACTTTAAACTACAGGCT
CTTCTATGATGGAAAACACTTTGTGGGCGAGAAGAGGTTTGAATCGATTCACGATCTGGTCACAGATGGCTTGATAACAT
TGTACATAGAAACAAAGGCTTCTGAATACATTTCCAAAATGACAACAAACCCCATTTATGAACACATTGGATATGCCACT
CTACTCCGAGAAAAAGTATCCAGGAGGCTGAGCAGGTCTAAAAATGAATCAAGAAAAACAAGCGTTACAAATGAAGAACA
CACAACAGTTGAAAAGATCTCGTCCCTGGTCCGAAGGGCCGCCCTCACGCACAACGACAACCACTTCAACTACGAGAAGA
CCCACAACTTCAAGGTCCATACATTCCGAGGCCCGCACTGGTGTGAATACTGTGCCAACTTCATGTGGGGGCTCATTGCC
CAAGGGGTTCGGTGCTCAGACTGTGGATTGAATGTACACAAACAGTGTTCCAAGCACGTTCCCAACGACTGTCAACCTGA
TCTCAAGAGGATTAAGAAGGTGTACTGTTGTGACCTCACAACACTTGTGAAGGCTCACAATACTCAGAGACCCATGGTGG
TAGACATATGCATACGGGAAATTGAAGCAAGAGGATTGAAGTCAGAAGGCCTTTACAGAGTCTCTGGGTTCACTGAACAC
ATCGAAGATGTCAAGATGGCATTTGACAGAGATGGTGAAAAGGCAGATATATCTGCCAACATCTACCCAGACATAAACAT
CATCACTGGAGCCCTTAAACTATACTTCAGAGACTTACCCATTCCTGTTATCACCTATGACACCTATCCCAAATTTATTG
AGGCAGCAAAAATCTCCAACGCAGATGAGAGGCTGGAAGCCGTCCATGACGTGCTGATGCTGCTGCCCCCTGCCCACTAT
GAGACCCTCCGATACCTGATGATCCACCTCAAGAAGGTGACTATGAATGAGAAGGACAATTTCATGAATGCTGAAAATCT
GGGGATCGTGTTTGGGCCCACACTGATGAGGTCCCCTGAGGACAGCACCCTCACCACCCTCCATGATATGCGGTACCAAA
AGCTGATCGTGCAGATTTTAATAGAAAATGAAGATGTTTTGTTTTAA
ATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCCTCCGTGTCCTCCGATGCTGAAGAATACCAGCCTCCAATATGGAA
ATCATACTTGTATCAATTACAGCAAGAGGCCCCTCGTCCCAAGAGGATCATTTGTCCTGGGGAGGTGGAGAACAGACCAA
AATATTATGGAAGAGAGTTTCACGGGATCATCTCCCGGGAACAGGCAGACGAGCTTCTCGGAGGCGTGGAGGGCGCCTAC
ATTCTTAGAGAAAGTCAGCGCCAGCCAGGATGCTACACATTAGCTCTCAGATTTGGAAACCAGACTTTAAACTACAGGCT
CTTCTATGATGGAAAACACTTTGTGGGCGAGAAGAGGTTTGAATCGATTCACGATCTGGTCACAGATGGCTTGATAACAT
TGTACATAGAAACAAAGGCTTCTGAATACATTTCCAAAATGACAACAAACCCCATTTATGAACACATTGGATATGCCACT
CTACTCCGAGAAAAAGTATCCAGGAGGCTGAGCAGGTCTAAAAATGAATCAAGAAAAACAAGCGTTACAAATGAAGAACA
CACAACAGTTGAAAAGATCTCGTCCCTGGTCCGAAGGGCCGCCCTCACGCACAACGACAACCACTTCAACTACGAGAAGA
CCCACAACTTCAAGGTCCATACATTCCGAGGCCCGCACTGGTGTGAATACTGTGCCAACTTCATGTGGGGGCTCATTGCC
CAAGGGGTTCGGTGCTCAGACTGTGGATTGAATGTACACAAACAGTGTTCCAAGCACGTTCCCAACGACTGTCAACCTGA
TCTCAAGAGGATTAAGAAGGTGTACTGTTGTGACCTCACAACACTTGTGAAGGCTCACAATACTCAGAGACCCATGGTGG
TAGACATATGCATACGGGAAATTGAAGCAAGAGGATTGAAGTCAGAAGGCCTTTACAGAGTCTCTGGGTTCACTGAACAC
ATCGAAGATGTCAAGATGGCATTTGACAGAGATGGTGAAAAGGCAGATATATCTGCCAACATCTACCCAGACATAAACAT
CATCACTGGAGCCCTTAAACTATACTTCAGAGACTTACCCATTCCTGTTATCACCTATGACACCTATCCCAAATTTATTG
AGGCAGCAAAAATCTCCAACGCAGATGAGAGGCTGGAAGCCGTCCATGACGTGCTGATGCTGCTGCCCCCTGCCCACTAT
GAGACCCTCCGATACCTGATGATCCACCTCAAGAAGGTGACTATGAATGAGAAGGACAATTTCATGAATGCTGAAAATCT
GGGGATCGTGTTTGGGCCCACACTGATGAGGTCCCCTGAGGACAGCACCCTCACCACCCTCCATGATATGCGGTACCAAA
AGCTGATCGTGCAGATTTTAATAGAAAATGAAGATGTTTTGTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 55 .57 RPM |
| SRP017611_kidney | 7 .59 RPM |
| SRP017611_liver | 34 .37 RPM |
| SRP012049_cerebellum | 395 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000008329 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009401 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016687 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_2185 | 71.47 | 82.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000003023 retrocopies