Parental gene: | PHAX, ENSCAFG00000000590 |
| Aliases: | None |
| Description: | phosphorylated adaptor for RNA export [Source:HGNC Symbol;Acc:10241] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 11:15885594..15900171(+) |
>ENSCAFG00000000590
TTACAGAAAACACTAGGTGGGGACAGCACCGTGAGACCCTTCCAGGGTACTGCAACACCATGTGTACCGGTATCACATTA
TCGAACTGTTAAAAGCGTGGATTCAAGTGAAGAGAGTTTTTCTGATTCAGATGATGATAGCTCCCTTTGGAAGCGCAAGC
GACAGAAATGTTTTAACCCTCCTCCAAAGCCAGAGCCTTTTCAGTTTGGCCAGAGCAGCCAGAAACCTCTTGTTCCTGGA
GGAAAGAAAGTTAACAATATATGGGGTGCTGTGCTACAAGAACAGAATCAAGATGCAGTGGCTACTGAACTTGGTATCTT
GGGAATGGAGGGTACTATTGACAAAAGCAGACAATCTGAGACTTACAATTATTTGCTTGCTAAGAAACTTAAGAGGGAAT
CTCAAGAACATACAAAAGAGTTAGACAAAGAGCTGGATGAATATATGCATGGTGGCAAAAAAATGGGATCAAAGGAAGAG
GAAAATGGGCAAGGTCATCTCAAACGGAAACGACCTGTCAAAGACAGACTAGGGGACAGACTAGAAATGAACTATAAAGG
CCGGTATGAGATCACAGAGGATGATGCACAAGAGAAAGTGGCTGATGAAATTTCTTTCAGGTTGCAGGAACCAAAGAAAG
ATCTGATAGCACGAGTAGTGAGGATAATTGGGAACAAAAAGGCGATTGAACTTCTGATGGAAACTGCTGAAGTTGAACAA
AATGGTGGCCTTTTTATAATGAATGGTAGTCGAAGAAGAACACCAGGTGGAGTTTTCCTGAATCTCCTGAAAAATACTCC
TAGTATTAGCGAGGAACAAATTAAGGACATTTTCTACATTGAAAATCAAAAGGAGTATGAAAATAAAAAGGCTGCTAGAA
AGCGGAGAACACAAGTGTTGGGAAAAAAGATGAAACAAGCTATTAAAAATCTAAATTTTCAAGAAGATGATGATACATCA
CGAGAAACTTTCGCGAGTGATACGAATGAGGCCCTGGCCTCTCTGGACGAGCCGCAGGAAGGCCATGGGGAGACAAAATT
GGACCCAGAAGAAGCCATTGAAGTTGATCATTCTAATGATTTGGACATCTTTTAG
TTACAGAAAACACTAGGTGGGGACAGCACCGTGAGACCCTTCCAGGGTACTGCAACACCATGTGTACCGGTATCACATTA
TCGAACTGTTAAAAGCGTGGATTCAAGTGAAGAGAGTTTTTCTGATTCAGATGATGATAGCTCCCTTTGGAAGCGCAAGC
GACAGAAATGTTTTAACCCTCCTCCAAAGCCAGAGCCTTTTCAGTTTGGCCAGAGCAGCCAGAAACCTCTTGTTCCTGGA
GGAAAGAAAGTTAACAATATATGGGGTGCTGTGCTACAAGAACAGAATCAAGATGCAGTGGCTACTGAACTTGGTATCTT
GGGAATGGAGGGTACTATTGACAAAAGCAGACAATCTGAGACTTACAATTATTTGCTTGCTAAGAAACTTAAGAGGGAAT
CTCAAGAACATACAAAAGAGTTAGACAAAGAGCTGGATGAATATATGCATGGTGGCAAAAAAATGGGATCAAAGGAAGAG
GAAAATGGGCAAGGTCATCTCAAACGGAAACGACCTGTCAAAGACAGACTAGGGGACAGACTAGAAATGAACTATAAAGG
CCGGTATGAGATCACAGAGGATGATGCACAAGAGAAAGTGGCTGATGAAATTTCTTTCAGGTTGCAGGAACCAAAGAAAG
ATCTGATAGCACGAGTAGTGAGGATAATTGGGAACAAAAAGGCGATTGAACTTCTGATGGAAACTGCTGAAGTTGAACAA
AATGGTGGCCTTTTTATAATGAATGGTAGTCGAAGAAGAACACCAGGTGGAGTTTTCCTGAATCTCCTGAAAAATACTCC
TAGTATTAGCGAGGAACAAATTAAGGACATTTTCTACATTGAAAATCAAAAGGAGTATGAAAATAAAAAGGCTGCTAGAA
AGCGGAGAACACAAGTGTTGGGAAAAAAGATGAAACAAGCTATTAAAAATCTAAATTTTCAAGAAGATGATGATACATCA
CGAGAAACTTTCGCGAGTGATACGAATGAGGCCCTGGCCTCTCTGGACGAGCCGCAGGAAGGCCATGGGGAGACAAAATT
GGACCCAGAAGAAGCCATTGAAGTTGATCATTCTAATGATTTGGACATCTTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 8 .26 RPM |
| SRP017611_kidney | 9 .97 RPM |
| SRP017611_liver | 4 .86 RPM |
| SRP012049_cerebellum | 11 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010042 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000184 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1136 | 64.94 | 62.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1701 | 97.80 | 99.45 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000000590 retrocopies