Parental gene:

PTP4A3, ENSBTAG00000046467

Aliases:None
Description:Protein tyrosine phosphatase type IVA 3 [Source:UniProtKB/Swiss-Prot;Acc:A2VDT1]
Organism:Cow (Bos taurus)
Coordinates:14:3578345..3586015(-)


>ENSBTAG00000046467
ATGGCGCGGATGAACCGGCCGGCCCCTGTGGAGGTCAGCTACAAGAACATGCGCTTCCTCATCACGCACAACCCCACCAA
TGCCACCCTCAGCAGCTTCATCGAGGACCTGAAGAAGTACGGGGCCACCACCGTGGTGCGCGTGTGTGAGGTGACCTACG
ACAAGGCCCCGCTGGAGAAGGACGGCATCACGGTTGTGGACTGGCCGTTTGATGATGGGGCACCCCCGCCCGGCAAAGTG
GTGGAGGACTGGCTGAGCCTGCTGAAGAACAAGTTCTGTGATGACCCCGGCAGCTGCGTGGCTGTGCACTGCGTGGCTGG
CCTGGGGCGGGCTCCCGTCCTCGTGGCGCTGGCCCTCATCGAGAGCGGGATGAAGTATGAGGACGCCATCCAGTTCATCC
GACAGAAGCGGCGCGGAGCCATCAACAGCAAACAGCTCACCTACCTGGAAAAATACCGGCCGAAGCAGAGACTGCGGTTC
AAGGACCCCCACGCGCACAAGACCAAGTGCTGCATCATGTAG

Library Parental gene expression (RPM)
SRP017611_brain 3 .20 RPM
SRP017611_kidney 1 .60 RPM
SRP017611_liver 3 .47 RPM
ERP005899_muscle 0 .84 RPM
ERP005899_liver 1 .59 RPM
SRP030211_testis 4 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002275 within_species_paralog 3 retrogenes
retro_btau_1051, retro_btau_1186, retro_btau_859,
Bos taurus ENSBTAG00000039121 within_species_paralog 1 retrogene
retro_btau_638,
Gorilla gorilla ENSGGOG00000010609 ortholog_one2one 1 retrogene
retro_ggor_843,
Microcebus murinus ENSMICG00000006858 ortholog_one2one 4 retrogenes
retro_mmur_269, retro_mmur_349, retro_mmur_642, retro_mmur_889,
Macaca mulatta ENSMMUG00000019392 ortholog_one2one 1 retrogene
retro_mmul_1132,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_380 51.22 67.05
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Download FASTA sequences of all ENSBTAG00000046467 retrocopies