Parental gene: | SNRNP27, ENSBTAG00000037746 |
| Aliases: | SNRNP27, RY1 |
| Description: | small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Source:RefSeq peptide;Acc:NP_001091631] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 11:68215015..68222914(+) |
>ENSBTAG00000037746
ATGGGTCGCAGTCGCAGCCGCTCCCCACGGAGGGAGCGTAGGCGGTCCCGGTCCACATCCCGGGAAAGAGAACGCCGGCG
CCGAGAAAGGTCCCGGTCCCGGGAGCGAGATCGGAGAAGAAGCCGTTCTCGGTCCCCACACAGAAGGCGTTCCAGGTCCC
CAAGACGACATAGATCCACATCTCCTTCCCCTTCTCGACTGAAAGAAAGAAGAGATGAGGAAAAGAAAGAAACAAAAGAA
ACCAAAAGCAAAGAACGTCAGATAACTGAGGAAGACTTAGAGGGCAAAACAGAGGAAGAAATAGAAATGATGAAGTTAAT
GGGATTTGCCTCCTTTGACTCCACAAAAGGGAAAAAGGTGGATGGCTCTGTAAATGCCTATGCCATAAATGTATCTCAGA
AGAGAAAGTATAGGCAGTACATGAATCGAAAAGGTGGATTCAACAGACCTTTGGATTTCATTGCATGA
ATGGGTCGCAGTCGCAGCCGCTCCCCACGGAGGGAGCGTAGGCGGTCCCGGTCCACATCCCGGGAAAGAGAACGCCGGCG
CCGAGAAAGGTCCCGGTCCCGGGAGCGAGATCGGAGAAGAAGCCGTTCTCGGTCCCCACACAGAAGGCGTTCCAGGTCCC
CAAGACGACATAGATCCACATCTCCTTCCCCTTCTCGACTGAAAGAAAGAAGAGATGAGGAAAAGAAAGAAACAAAAGAA
ACCAAAAGCAAAGAACGTCAGATAACTGAGGAAGACTTAGAGGGCAAAACAGAGGAAGAAATAGAAATGATGAAGTTAAT
GGGATTTGCCTCCTTTGACTCCACAAAAGGGAAAAAGGTGGATGGCTCTGTAAATGCCTATGCCATAAATGTATCTCAGA
AGAGAAAGTATAGGCAGTACATGAATCGAAAAGGTGGATTCAACAGACCTTTGGATTTCATTGCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 4 .61 RPM |
| SRP017611_kidney | 10 .19 RPM |
| SRP017611_liver | 5 .06 RPM |
| ERP005899_muscle | 6 .86 RPM |
| ERP005899_liver | 18 .02 RPM |
| SRP030211_testis | 10 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003042 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000017344 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000124380 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000001158 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000022967 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012332 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012022 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025674 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_375 | 61.36 | 81.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_514 | 68.71 | 89.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_515 | 65.31 | 94.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_1352 | 71.03 | 91.61 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000037746 retrocopies