Parental gene:

PPP1R14C, ENSBTAG00000026586

Aliases:None
Description:protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:RefSeq peptide;Acc:NP_001071536]
Organism:Cow (Bos taurus)
Coordinates:9:88384682..88500749(+)


>ENSBTAG00000026586
ATGTCGGTGGCGACGGGCAGCAGCGAGGCGGCCGGCGGGGCCGCGGGCAGCGGTGCGCGTGTTTTCTTCCAGAGTCCCCG
GGGCGGTGCCAGCGGCAGCCCGGGCTCGAGCAGCGGCTCGGGCTCCTCCCGGGAGGACTCGGCGCCCGTGGCCACCGCGG
CTCCCGCCGGGCACGTTCAGCAGCAGCAGCAGCAGCAACAGCGGCGCCACCAGCAGGGAAAAGTGACGGTAAAATACGAT
CGCAAGGAGCTTCGGAAACGGCTCGTGCTGGAGGAGTGGATCGTGGAGCAGCTGGGACAGCTGTATGGCTGCGAGGAAGA
AGAAATGCCAGATGTGGAAATTGACATTGATGATCTTCTTGATGCAGACAGTGAAGAAGAGAGGGCTTTAAAATTACGAG
AAGCTCTTGTAGACTGCTACAAACCAACAGAGGAGTTCATTAAGGAGCTGCTCTCTCGGATAAGAGGCATGCGGAAGTTG
AGCCCCCCACAGAAGAAGGCTGTATAA

Library Parental gene expression (RPM)
SRP017611_brain 3 .84 RPM
SRP017611_kidney 6 .40 RPM
SRP017611_liver 0 .00 RPM
ERP005899_muscle 0 .11 RPM
ERP005899_liver 0 .00 RPM
SRP030211_testis 0 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000023472 within_species_paralog 1 retrogene
retro_btau_282,
Dasypus novemcinctus ENSDNOG00000017261 ortholog_one2one 2 retrogenes
retro_dnov_1661, retro_dnov_80,
Myotis lucifugus ENSMLUG00000023245 ortholog_one2one 2 retrogenes
retro_mluc_1095, retro_mluc_499,
Mus musculus ENSMUSG00000040653 ortholog_one2one 2 retrogenes
retro_mmus_2089, retro_mmus_3721,
Pongo abelii ENSPPYG00000017102 ortholog_one2one 4 retrogenes
retro_pabe_1880, retro_pabe_2079, retro_pabe_3001, retro_pabe_3232,
Tarsius syrichta ENSTSYG00000002873 ortholog_one2one 1 retrogene
retro_tsyr_245,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_161 50.72 81.55
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2. retro_btau_571 83.53 100.00
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Download FASTA sequences of all ENSBTAG00000026586 retrocopies