Parental gene:

KLF4, ENSBTAG00000020355

Aliases:None
Description:Krueppel-like factor 4 [Source:RefSeq peptide;Acc:NP_001098855]
Organism:Cow (Bos taurus)
Coordinates:8:98843683..98847740(-)


>ENSBTAG00000020355
ATGGCTGTCAGCGACGCGCTGCTCCCGTCCTTCTCCACGTTCGCGTCCGGCCCGGCGGGAAGGGAGAAGACACTGCGTCC
AGCAGGTGCCCCAAATAACCGCTGGCGGGAGGAGCTCTCCCACATGAAGCGACTTCCCCCGGTGCTTCCCGGCCGCCCCT
ACGACCTGGCGGCGGCGACCGTGGCCACCGACCTGGAGAGTGGAGGAGTCGGCGCGGCTTGCGGCAGCAGCAACCCGGCT
CTCCTGCCCCGGAGGGAGACGGAGGAGTTCAATGATCTCCTGGACCTGGACTTTATCCTCTCCAACTCGCTGTCCCATCA
GGAGTCCGTGGCCGCCACGGTGTCCTCGTCGGCATCAGCCTCATCCTCGTCCTCCCCGTCGAGCAGCGGTCCAGCCAGTG
CGCCTTCCACCTGCAGCTTCAGCTATCCAATCCGGGCCGGGGGCGACCCGGGCGTGGCGGCGCCGGGCGGCGCGGGCGGC
GGCCTCCTGTACGGCCGGGAGTCTGCACCGCCTCCGACGGCTCCCTTCAACCTGGCGGACATCAACGATGTGAGCCCCTC
CGGCGGCTTCGTGGCCGAGCTCCTGCGGCCTGAATTGGACCCAGTGTACATTCCGCCGCAGCAGCCGCAGCCGCCAGGTG
GCGGGCTGATGGGCAAGTTCGTGTTGAAGGCGTCGCTGAGTGCCCCTGGCAGCGAGTACGGCAGCCCGTCGGTCATCAGT
GTTAGCAAAGGCAGCCCGGACGGCAGCCACCCGGTGGTGGTGGCGCCCTACAGCGGCGGGCCGCCACGCATGTGCCCCAA
GATCAAGCAGGAGGCTGTCTCCTCGTGCACCGTCGGTCGGCCCCTAGAGGCCCACTTGGGCACTGGACCTCCTCTCAGCA
ATGGCCACCGGCCGCCTGCTCACGACTTTCCCTTGGGGCGGCAGCTCCCCAGCAGGACTACCCCGACCCTGGGTGCCGAG
GAACTGCTGAGCAGCCGGGACTGTCATCCTGCCCTGCCGCTCCCCCCGGGCTTCCATCCCCACCCCGGGCCCAACTACCC
TCCCTTCCTGCCCGACCAGATGCAGCCGCAGGTCCCACCGCTCCATTACCAAGAGCTCATGCCACCCGGTTCCTGCATGC
CGGAGGAGCCCAAACCAAAGAGGGGAAGACGGTCGTGGCCCCGGAAAAGGACGGCCACTCACACTTGTGATTATGCAGGC
TGCGGCAAAACCTACACGAAGAGTTCTCATCTCAAGGCACACCTGCGCACCCACACAGGTGAGAAACCTTACCACTGTGA
CTGGGATGGTTGTGGGTGGAAGTTTGCCCGCTCAGATGAACTGACCAGGCACTACCGCAAACACACCGGGCACCGCCCCT
TCCAGTGCCAGAAGTGCGACCGGGCATTCTCGAGGTCGGACCACCTCGCCTTACACATGAAGAGGCACTTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 5 .25 RPM
SRP017611_kidney 13 .16 RPM
SRP017611_liver 2 .11 RPM
ERP005899_muscle 69 .95 RPM
ERP005899_liver 1 .44 RPM
SRP030211_testis 119 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013740 other_paralog 1 retrogene
retro_btau_1617,
Bos taurus ENSBTAG00000017488 other_paralog 1 retrogene
retro_btau_271,
Bos taurus ENSBTAG00000038055 other_paralog 1 retrogene
retro_btau_1360,
Pongo abelii ENSPPYG00000019478 ortholog_one2one 7 retrogenes
retro_pabe_1836, retro_pabe_2020, retro_pabe_2022, retro_pabe_2024, retro_pabe_2027, retro_pabe_2037, retro_pabe_3579,
Rattus norvegicus ENSRNOG00000016299 ortholog_one2one 1 retrogene
retro_rnor_2164,
Ictidomys tridecemlineatus ENSSTOG00000022002 ortholog_one2one 1 retrogene
retro_itri_1862,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_521 73.64 52.83
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000020355 retrocopies