Parental gene: | PAFAH1B3, ENSBTAG00000019787 |
| Aliases: | None |
| Description: | Platelet-activating factor acetylhydrolase IB subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:Q29460] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 18:51308583..51311417(+) |
>ENSBTAG00000019787
ATGAGTGGAGACGAGAACCCAGCCAGCAAGCCCACGCCAGTGCAGGACGTGCAGGGTGACGGGCGCTGGATGTCCCTGCA
CCATCGGTTCGTAGCCGACAGCAAAGATAAGGAACCCGAAGTCGTCTTCATCGGTGACTCCTTGGTCCAGCTGATGCACC
AGTGCGAGATCTGGCGGGAGCTCTTTTCCCCTCTGCACGCACTTAACTTTGGCATTGGCGGTGACAGCACACAGCATGTG
CTGTGGCGTCTGGAGAATGGAGAGCTGGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTTGGTACCAACAACCACGG
GCACACTGCAGAGCAGGTGACTGGGGGCATCAAGGCCATAGTGCAGCTGGTGAACGAGCGGCAGCCCCAGGCACGGGTCG
TGGTGCTGGGCCTGCTTCCTCGGGGCCAGCACCCCAACCCACTTCGAGAGAAAAACCGACGGGTGAATGAGCTGGTACGG
GCAGCACTGGCCGGCCACCCTCGGGCCCACTTCCTGGACGCAGACCCTGGCTTTGTGCACTCAGATGGTACCATCAGCCA
CCATGACATGTACGATTACCTGCACCTGAGCCGTCTGGGGTACACACCTGTTTGCCGGGCCCTGCACTCCTTGCTTCTGC
GTCTGCTAACCCAAGACCAGGGACAGGGTGGTGCCCCCCTGCCGGAACCCAGCCCCTAA
ATGAGTGGAGACGAGAACCCAGCCAGCAAGCCCACGCCAGTGCAGGACGTGCAGGGTGACGGGCGCTGGATGTCCCTGCA
CCATCGGTTCGTAGCCGACAGCAAAGATAAGGAACCCGAAGTCGTCTTCATCGGTGACTCCTTGGTCCAGCTGATGCACC
AGTGCGAGATCTGGCGGGAGCTCTTTTCCCCTCTGCACGCACTTAACTTTGGCATTGGCGGTGACAGCACACAGCATGTG
CTGTGGCGTCTGGAGAATGGAGAGCTGGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTTGGTACCAACAACCACGG
GCACACTGCAGAGCAGGTGACTGGGGGCATCAAGGCCATAGTGCAGCTGGTGAACGAGCGGCAGCCCCAGGCACGGGTCG
TGGTGCTGGGCCTGCTTCCTCGGGGCCAGCACCCCAACCCACTTCGAGAGAAAAACCGACGGGTGAATGAGCTGGTACGG
GCAGCACTGGCCGGCCACCCTCGGGCCCACTTCCTGGACGCAGACCCTGGCTTTGTGCACTCAGATGGTACCATCAGCCA
CCATGACATGTACGATTACCTGCACCTGAGCCGTCTGGGGTACACACCTGTTTGCCGGGCCCTGCACTCCTTGCTTCTGC
GTCTGCTAACCCAAGACCAGGGACAGGGTGGTGCCCCCCTGCCGGAACCCAGCCCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 11 .10 RPM |
| SRP017611_kidney | 16 .48 RPM |
| SRP017611_liver | 0 .45 RPM |
| ERP005899_muscle | 21 .12 RPM |
| ERP005899_liver | 0 .58 RPM |
| SRP030211_testis | 8 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000004847 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002870 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012172 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007574 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_547 | 63.08 | 53.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000019787 retrocopies