Parental gene: | ZCCHC17, ENSBTAG00000016818 |
| Aliases: | None |
| Description: | nucleolar protein of 40 kDa [Source:RefSeq peptide;Acc:NP_001029824] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 2:122784557..122889605(-) |
>ENSBTAG00000016818
ATGAATTCAGGAAGACCGGAGACCATGGAGAACTTGCCTGCTCTCTATACTATTTTCCAAGGAGAGGTTGCTATGGTCAC
GGACTATGGAGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCACATGTCATCCTGTCGCG
TGGATAAGCCCTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGG
ATAAAAGTATCCCTCTCCATGAAGGTTGTCAACCAAGGGACTGGAAAGGACCTTGATCCCAACAACGTTATCATTGAGCA
AGAAGAGAGGCGGAGGCGGTCCTTCCAGGATTACACTGGGCAGAAGATCACCCTCGAGGCTGTCCTGAACACCACCTGCA
AGAAGTGTGGCTGTAAAGGCCACTTTGCAAAGGATTGTTTCATGCAACCAGGTGGGACCAAGTATTCTCTGATACCTGAC
GAGGAAGAGGAGAAAGAAGAGGCAAAGTCAGCAGAGTTTGAAAAGCCTGACACCACGAGAAATTCTTCTAGAAAAAGAAA
GAAGGAAAAGAAGAAAAAGAAACATAGAGACAGGAAGTCATCTGACTCCGACAGCTCAGACTCTGAGAGTGATACAGGCA
AGAGGGCAAGACACACGTCAAAGGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAG
GAGTGA
ATGAATTCAGGAAGACCGGAGACCATGGAGAACTTGCCTGCTCTCTATACTATTTTCCAAGGAGAGGTTGCTATGGTCAC
GGACTATGGAGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCACATGTCATCCTGTCGCG
TGGATAAGCCCTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGG
ATAAAAGTATCCCTCTCCATGAAGGTTGTCAACCAAGGGACTGGAAAGGACCTTGATCCCAACAACGTTATCATTGAGCA
AGAAGAGAGGCGGAGGCGGTCCTTCCAGGATTACACTGGGCAGAAGATCACCCTCGAGGCTGTCCTGAACACCACCTGCA
AGAAGTGTGGCTGTAAAGGCCACTTTGCAAAGGATTGTTTCATGCAACCAGGTGGGACCAAGTATTCTCTGATACCTGAC
GAGGAAGAGGAGAAAGAAGAGGCAAAGTCAGCAGAGTTTGAAAAGCCTGACACCACGAGAAATTCTTCTAGAAAAAGAAA
GAAGGAAAAGAAGAAAAAGAAACATAGAGACAGGAAGTCATCTGACTCCGACAGCTCAGACTCTGAGAGTGATACAGGCA
AGAGGGCAAGACACACGTCAAAGGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAG
GAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 49 .88 RPM |
| SRP017611_kidney | 17 .13 RPM |
| SRP017611_liver | 9 .44 RPM |
| ERP005899_muscle | 34 .21 RPM |
| ERP005899_liver | 18 .74 RPM |
| SRP030211_testis | 58 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017710 | ortholog_many2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000011131 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006259 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000000509 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000004128 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007421 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000015364 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000594 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017082 | ortholog_many2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015442 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000028772 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013749 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000007944 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003825 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014870 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_168 | 95.78 | 98.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_273 | 77.82 | 98.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000016818 retrocopies