Parental gene:

PLA2G12A, ENSBTAG00000015230

Aliases:None
Description:group XIIA secretory phospholipase A2 precursor [Source:RefSeq peptide;Acc:NP_001091532]
Organism:Cow (Bos taurus)
Coordinates:6:16828641..16843001(+)


>ENSBTAG00000015230
ATGGCCCTGCTCGCAGTCCTCCTGGTCCTCTTCCTGACCGCCGGTGGGAGGTGCCAGGAGCAAGCCCAGACCACCGACTG
GAGGGCCACCCTGAAGACCATCCGGAACGGCGTTCACAAGATTGACATGTATCTGAACGCCGCCTTGGACCTCCTGGGAG
GCGAGGACGGGCTCTGCCAGTATAAGTGCAGTGACGGATCTAAGCCTTTCCCACGTTATGGATATAAACCCTCCCCACCG
AATGGATGTGGCTCCCCACTGTTTGGTGTTCATCTTAACATTGGCATCCCTTCCCTGACAAAGTGCTGCAACCAACATGA
CCGGTGCTATGAGACCTGCGGCAAAAGCAAAAACGACTGTGATGAGGCGTTTCAGTCTTGCCTGTCCAAGATTTGCAGAG
ATGTGCAGAAAACACTGGGGCTGGCTCAGCACGTGCAGGCCTGTGAAACCACTGTGGAGCTCTTGTTTGACAGCGTCATA
CACTTAGGCTGTAAGCCGTACTTGGACAGCCAACGAGCCGCATGTAGGTGTCGCTACGAAGAAAAAACCGATCTTTGA

Library Parental gene expression (RPM)
SRP017611_brain 25 .90 RPM
SRP017611_kidney 34 .44 RPM
SRP017611_liver 78 .08 RPM
ERP005899_muscle 33 .89 RPM
ERP005899_liver 87 .24 RPM
SRP030211_testis 19 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016169 ortholog_one2one 2 retrogenes
retro_cjac_1992, retro_cjac_3936,
Dasypus novemcinctus ENSDNOG00000016573 ortholog_one2one 7 retrogenes
retro_dnov_1694, retro_dnov_172, retro_dnov_1856, retro_dnov_1930, retro_dnov_2286, retro_dnov_2572, retro_dnov_434,
Homo sapiens ENSG00000123739 ortholog_one2one 1 retrogene
retro_hsap_153,
Gorilla gorilla ENSGGOG00000001082 ortholog_one2one 2 retrogenes
retro_ggor_242, retro_ggor_929,
Loxodonta africana ENSLAFG00000000852 ortholog_one2one 2 retrogenes
retro_lafr_402, retro_lafr_718,
Mustela putorius furo ENSMPUG00000008637 ortholog_one2one 1 retrogene
retro_mputfur_964,
Mus musculus ENSMUSG00000027999 ortholog_one2one 1 retrogene
retro_mmus_2368,
Otolemur garnettii ENSOGAG00000004686 ortholog_one2one 1 retrogene
retro_ogar_670,
Ochotona princeps ENSOPRG00000014505 ortholog_one2many 2 retrogenes
retro_opri_30, retro_opri_921,
Pan troglodytes ENSPTRG00000016362 ortholog_one2one 1 retrogene
retro_ptro_817,
Sus scrofa ENSSSCG00000009139 ortholog_one2one 3 retrogenes
retro_sscr_622, retro_sscr_623, retro_sscr_670,
Tarsius syrichta ENSTSYG00000004756 ortholog_one2one 4 retrogenes
retro_tsyr_1366, retro_tsyr_376, retro_tsyr_487, retro_tsyr_493,
Vicugna pacos ENSVPAG00000009842 ortholog_one2one 1 retrogene
retro_vpac_466,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1557 62.22 96.76
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Download FASTA sequences of all ENSBTAG00000015230 retrocopies