Parental gene: | BT.64559, ENSBTAG00000013631 |
| Aliases: | None |
| Description: | Glutamine synthetase [Source:UniProtKB/Swiss-Prot;Acc:P15103] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 16:64948331..64958885(-) |
>ENSBTAG00000013631
ATGGCCACCTCGGCGAGCTCCCACTTGAACAAAGGCATCAAGCAGGTGTACATGGCCCTACCTCAGGGTGATAAAGTCCA
AGCTATGTACATCTGGATCGACGGTACTGGAGAAGGACTGCGCTGCAAGACCCGAACCTTGGATTCTGAACCCAAGTGTA
TAGAAGAGTTGCCCGAGTGGAATTTTGATGGCTCTAGTACTTTTCAGTCTGAAGGCTCCAACAGTGACATGTATCTTGTC
CCCGCTGCCATGTTTCGGGACCCTTTCCGCAAGGACCCCAACAAGCTGGTGTTCTGTGAAGTCTTCAAGTACAACCGAAA
GCCTGCAGAGACCAATTTAAGGCACACCTGTAAACGGATAATGGACATGGTGAGCAACCAGCGCCCCTGGTTTGGAATGG
AGCAGGAATATACCCTCATGGGCACTGATGGGCACCCCTTTGGTTGGCCTTCCAATGGCTTTCCTGGGCCCCAAGGTCCC
TACTACTGTGGTGTGGGAGCGGACAAGGCCTACGGCAGGGATATTGTGGAGGCTCACTACAGGGCCTGCTTGTACGCCGG
CATCAAGATCGGGGGCACGAATGCCGAGGTCATGCCTGCACAGTGGGAATTCCAGATAGGACCCTGTGAAGGAATCGACA
TGGGCGATCATCTCTGGGTGGCCCGTTTCATCTTGCATCGTGTGTGTGAAGACTTCGGAGTGATCGCCACCTTTGATCCT
AAGCCCATTCCTGGAAACTGGAATGGTGCTGGCTGCCACACCAACTTTAGCACCAAGGCCATGCGAGAGGAGAATGGTCT
GAAGTACATTGAGGAGGCCATTGAGAAGCTAAGCAAGCGCCACCAGTACCACATCCGAGCCTACGATCCCAAGGGGGGCC
TGGACAACGCCCGGCGCCTAACTGGGTTCCACGAAACCTCCAACATCAACGACTTCTCTGCCGGCGTGGCCAACCGTGGT
GCTAGCATCCGCATCCCCCGGACTGTTGGCCAGGAGAAGAAGGGCTACTTCGAAGACCGTCGCCCATCTGCCAACTGTGA
CCCCTTCGCCGTGACCGAAGCCCTCATCCGCACATGTCTTCTGAACGAAACTGGCGACGAGCCCTTCCAGTACAAGAACT
AA
ATGGCCACCTCGGCGAGCTCCCACTTGAACAAAGGCATCAAGCAGGTGTACATGGCCCTACCTCAGGGTGATAAAGTCCA
AGCTATGTACATCTGGATCGACGGTACTGGAGAAGGACTGCGCTGCAAGACCCGAACCTTGGATTCTGAACCCAAGTGTA
TAGAAGAGTTGCCCGAGTGGAATTTTGATGGCTCTAGTACTTTTCAGTCTGAAGGCTCCAACAGTGACATGTATCTTGTC
CCCGCTGCCATGTTTCGGGACCCTTTCCGCAAGGACCCCAACAAGCTGGTGTTCTGTGAAGTCTTCAAGTACAACCGAAA
GCCTGCAGAGACCAATTTAAGGCACACCTGTAAACGGATAATGGACATGGTGAGCAACCAGCGCCCCTGGTTTGGAATGG
AGCAGGAATATACCCTCATGGGCACTGATGGGCACCCCTTTGGTTGGCCTTCCAATGGCTTTCCTGGGCCCCAAGGTCCC
TACTACTGTGGTGTGGGAGCGGACAAGGCCTACGGCAGGGATATTGTGGAGGCTCACTACAGGGCCTGCTTGTACGCCGG
CATCAAGATCGGGGGCACGAATGCCGAGGTCATGCCTGCACAGTGGGAATTCCAGATAGGACCCTGTGAAGGAATCGACA
TGGGCGATCATCTCTGGGTGGCCCGTTTCATCTTGCATCGTGTGTGTGAAGACTTCGGAGTGATCGCCACCTTTGATCCT
AAGCCCATTCCTGGAAACTGGAATGGTGCTGGCTGCCACACCAACTTTAGCACCAAGGCCATGCGAGAGGAGAATGGTCT
GAAGTACATTGAGGAGGCCATTGAGAAGCTAAGCAAGCGCCACCAGTACCACATCCGAGCCTACGATCCCAAGGGGGGCC
TGGACAACGCCCGGCGCCTAACTGGGTTCCACGAAACCTCCAACATCAACGACTTCTCTGCCGGCGTGGCCAACCGTGGT
GCTAGCATCCGCATCCCCCGGACTGTTGGCCAGGAGAAGAAGGGCTACTTCGAAGACCGTCGCCCATCTGCCAACTGTGA
CCCCTTCGCCGTGACCGAAGCCCTCATCCGCACATGTCTTCTGAACGAAACTGGCGACGAGCCCTTCCAGTACAAGAACT
AA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 2225 .86 RPM |
| SRP017611_kidney | 357 .59 RPM |
| SRP017611_liver | 226 .53 RPM |
| ERP005899_muscle | 105 .05 RPM |
| ERP005899_liver | 97 .19 RPM |
| SRP030211_testis | 456 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013102 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004654 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013948 | ortholog_one2one | 4 retrogenes | |
| Equus caballus | ENSECAG00000015865 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008329 | ortholog_one2many | 3 retrogenes | |
| Felis catus | ENSFCAG00000010551 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000135821 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024712 | ortholog_one2many | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000000700 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000001774 | ortholog_one2one | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000022884 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006787 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000026473 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000018007 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000000440 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001751 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000000116 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000015545 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014529 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003522 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000002066 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010781 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0001145 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_336 | 83.54 | 84.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_824 | 94.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1050 | 95.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_1474 | 77.63 | 60.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000013631 retrocopies