Parental gene:

TMEM230, ENSBTAG00000006063

Aliases:TMEM230, C13H20orf30, C20orf30
Description:Transmembrane protein 230 [Source:UniProtKB/Swiss-Prot;Acc:Q5E975]
Organism:Cow (Bos taurus)
Coordinates:13:47779509..47787910(-)


>ENSBTAG00000006063
ATGATGCCGTCTCGTACCAACCTGGCTACTGGAATTCCCAGTAGCAAAGTGAAATACTCAAGACTCTCTAGTACGGATGA
TGGCTACATTGACCTTCAGTTTAAGAAAAGCCCTCCTAAGATCCCATATAAGGCCATTGCGCTTGCTACAGTGCTGTTTT
TGATTGGCGCCTTTCTCATTATCATAGGCTCCCTCCTGCTGGCAGGCTATATCAGCAAAGGGGGGGCAGACCGGGCCGTT
CCTGTCCTGATCATTGGCATCCTAGTGTTCCTGCCAGGATTTTACCACCTGCGCATCGCCTACTATGCATCCAAAGGCTA
CCGGGGATACTCCTATGATGACATTCCAGACTTTGATGACTAG

Library Parental gene expression (RPM)
SRP017611_brain 24 .71 RPM
SRP017611_kidney 35 .92 RPM
SRP017611_liver 26 .20 RPM
ERP005899_muscle 40 .91 RPM
ERP005899_liver 32 .01 RPM
SRP030211_testis 73 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009083 possible_ortholog 1 retrogene
retro_amel_1818,
Canis familiaris ENSCAFG00000006039 ortholog_one2one 1 retrogene
retro_cfam_981,
Choloepus hoffmanni ENSCHOG00000010231 possible_ortholog 12 retrogenes
retro_chof_1228, retro_chof_1463, retro_chof_1812, retro_chof_2199, retro_chof_2210, retro_chof_2400, retro_chof_253, retro_chof_2584, retro_chof_2661, retro_chof_397, retro_chof_884, retro_chof_996,
Callithrix jacchus ENSCJAG00000021275 possible_ortholog 2 retrogenes
retro_cjac_3112, retro_cjac_4206,
Dasypus novemcinctus ENSDNOG00000005724 ortholog_one2many 5 retrogenes
retro_dnov_1004, retro_dnov_2377, retro_dnov_2534, retro_dnov_373, retro_dnov_803,
Erinaceus europaeus ENSEEUG00000014992 possible_ortholog 1 retrogene
retro_eeur_77,
Echinops telfairi ENSETEG00000018264 possible_ortholog 2 retrogenes
retro_etel_1604, retro_etel_665,
Homo sapiens ENSG00000089063 possible_ortholog 3 retrogenes
retro_hsap_4890, retro_hsap_550, retro_hsap_783,
Loxodonta africana ENSLAFG00000006412 possible_ortholog 1 retrogene
retro_lafr_1033,
Myotis lucifugus ENSMLUG00000023089 possible_ortholog 2 retrogenes
retro_mluc_1504, retro_mluc_1759,
Macaca mulatta ENSMMUG00000013258 possible_ortholog 4 retrogenes
retro_mmul_1187, retro_mmul_2386, retro_mmul_2626, retro_mmul_856,
Nomascus leucogenys ENSNLEG00000007719 possible_ortholog 3 retrogenes
retro_nleu_1256, retro_nleu_199, retro_nleu_723,
Otolemur garnettii ENSOGAG00000001386 possible_ortholog 2 retrogenes
retro_ogar_1700, retro_ogar_3108,
Ochotona princeps ENSOPRG00000008611 ortholog_one2many 1 retrogene
retro_opri_502,
Pongo abelii ENSPPYG00000010796 possible_ortholog 3 retrogenes
retro_pabe_3801, retro_pabe_507, retro_pabe_916,
Pan troglodytes ENSPTRG00000013221 possible_ortholog 4 retrogenes
retro_ptro_3030, retro_ptro_3257, retro_ptro_3258, retro_ptro_413,
Pteropus vampyrus ENSPVAG00000002863 ortholog_one2one 1 retrogene
retro_pvam_44,
Ictidomys tridecemlineatus ENSSTOG00000019378 possible_ortholog 1 retrogene
retro_itri_35,
Vicugna pacos ENSVPAG00000007009 possible_ortholog 1 retrogene
retro_vpac_212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_147 91.58 79.17
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_btau_1079 91.67 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000006063 retrocopies