Parental gene:

GDI2, ENSBTAG00000005316

Aliases:None
Description:Rab GDP dissociation inhibitor beta [Source:UniProtKB/Swiss-Prot;Acc:P50397]
Organism:Cow (Bos taurus)
Coordinates:13:43302439..43331090(+)


>ENSBTAG00000005316
ATGAATGAGGAGTACGACGTGATCGTGCTGGGCACTGGCCTGACGGAATGTATCCTGTCAGGTATAATGTCAGTGAATGG
CAAGAAAGTTCTTCACATGGATAGAAACCCGTATTATGGAGGAGAGAGTGCATCTATAACACCGCTGGAAGATTTATACA
AAAGATTTAAGATACCCGGAGCTCCACCAGCATCCATGGGCAGAGGAAGAGACTGGAATGTTGACTTAATCCCCAAGTTC
CTTATGGCAAATGGTCAGCTGGTTAAGATGCTGCTTTTTACGGAGGTTACTCGCTATCTGGATTTCAAAGTGACTGAAGG
GAGCTTTGTTTATAAGGGAGGAAAGATCTACAAGGTTCCTTCCACTGAAGCAGAAGCCCTGGCATCTAGCCTAATGGGGC
TGTTTGAAAAACGTCGATTCAGAAAATTCCTGGTATATGTCGCCAACTTTGATGAGAACGATCCTCGAACTTTTGAGGGC
ATTGATCCTAAGAAGACATCAATGCGAGAGGTGTATAAGAAATTTGACTTGGGCCAAGATGTTATAGATTTTACTGGTCA
TGCCCTGGCACTTTACAGAACTGATGACTATTTAGATCAGCCATGTTGTGAAACCATTAATAGGATTAAACTTTACAGCG
AATCTTTGGCAAGATACGGCAAAAGCCCATACCTTTATCCACTCTACGGCCTTGGAGAACTGCCACAGGGATTTGCACGG
CTAAGTGCTATATATGGAGGTACCTACATGCTGAATAAACCAATTGAAGAAATCATTATGCAAAATGGAAAGGTGATTGG
TGTAAAATCTGAAGGAGAGATTGCTCGCTGTAAGCAGCTCATCTGCGATCCCAGCTATGTGAAAGATCGAGTAGAAAAAG
TGGGCCAGGTGATCAGAGTCATCTGTATTCTCAGCCACCCCATCAAAAACACCAATGACGCCAACTCCTGCCAGATCATT
ATTCCACAGAACCAAGTCAACCGGAAGTCAGATATCTACGTCTGCATGATCTCCTCTGCACACAATGTGGCCGCACAAGG
CAAGTACATCGCCATTGCCAGCACAACGGTGGAGACCAAGGAGCCCGAGAAGGAAATCAGACCAGCCCTGGAGCTTTTGG
AACCAATTGAGCAGAAATTCGTTAGCATCAGTGACCTCCTTGTACCAAAAGACTTGGGAACAGAAAGCCAGATCTTTATA
TCCCGTACCTATGATGCAACAACTCACTTTGAGACGACCTGTGATGACATTAAGGACATCTATAAGAGGATGATGGGATC
CGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAAAATGACATCTATGGGGAAGAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 279 .06 RPM
SRP017611_kidney 358 .06 RPM
SRP017611_liver 227 .43 RPM
ERP005899_muscle 505 .03 RPM
ERP005899_liver 193 .22 RPM
SRP030211_testis 106 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009598 within_species_paralog 1 retrogene
retro_btau_227,
Canis familiaris ENSCAFG00000005223 ortholog_one2one 2 retrogenes
retro_cfam_2196, retro_cfam_886,
Callithrix jacchus ENSCJAG00000020512 ortholog_one2one 2 retrogenes
retro_cjac_1168, retro_cjac_3115,
Cavia porcellus ENSCPOG00000013449 ortholog_one2one 1 retrogene
retro_cpor_696,
Gorilla gorilla ENSGGOG00000003623 ortholog_one2one 1 retrogene
retro_ggor_2590,
Mus musculus ENSMUSG00000021218 ortholog_one2one 2 retrogenes
retro_mmus_2971, retro_mmus_360,
Oryctolagus cuniculus ENSOCUG00000005367 ortholog_one2many 1 retrogene
retro_ocun_69,
Ictidomys tridecemlineatus ENSSTOG00000006449 ortholog_one2one 1 retrogene
retro_itri_757,
Tupaia belangeri ENSTBEG00000011523 ortholog_one2one 1 retrogene
retro_tbel_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1208 92.64 88.31
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Download FASTA sequences of all ENSBTAG00000005316 retrocopies