Parental gene:

RPS7, ENSAMEG00000018435

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL194142.1:250229..255889(+)


>ENSAMEG00000018435
ATGTTCAGTTCGAGCGCGAAGATCGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCATCTCCCAGGCTCT
CCTTGAGTTGGAGATGAACTCCGACCTCAAAGCCCAGTTAAGGGAGCTGAATATCACGGCAGCCAAGGAAATTGAAGTTG
GCGGTGGTCGGAAAGCTATTATCATCTTCGTTCCCGTTCCTCAACTGAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTC
CGTGAATTGGAGAAAAAGTTCAGTGGGAAGCACGTTGTCTTTATTGCTCAGAGGAGAATTCTGCCTAAGCCAACTCGAAA
AAGCCGTACAAAAAATAAGCAGAAGCGTCCCAGGAGCCGCACATTGACAGCCGTGCATGACGCGATCCTGGAGGACTTGG
TTTTCCCAAGTGAAATTGTGGGCAAGAGAATCCGTGTGAAACTGGATGGCAGCCGGCTCATAAAGGTTCATTTGGATAAA
GCACAGCAGAACAACGTGGAGCACAAGGTTGAAACTTTTTCTGGGGTCTATAAGAAGCTCACAGGCAAGGATGTTAACTT
TGAGTTCCCCGAGTTTCAGTTGTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016462 possible_ortholog 2 retrogenes
retro_cjac_16, retro_cjac_2287,
Felis catus ENSFCAG00000023243 possible_ortholog 2 retrogenes
retro_fcat_1534, retro_fcat_41,
Gorilla gorilla ENSGGOG00000023095 possible_ortholog 13 retrogenes
retro_ggor_2028, retro_ggor_2090, retro_ggor_2161, retro_ggor_218, retro_ggor_2452, retro_ggor_2927, retro_ggor_294, retro_ggor_2965, retro_ggor_3047, retro_ggor_346, retro_ggor_400, retro_ggor_484, retro_ggor_597,
Loxodonta africana ENSLAFG00000015087 possible_ortholog 11 retrogenes
retro_lafr_1223, retro_lafr_160, retro_lafr_217, retro_lafr_318, retro_lafr_319, retro_lafr_413, retro_lafr_514, retro_lafr_720, retro_lafr_786, retro_lafr_964, retro_lafr_970,
Myotis lucifugus ENSMLUG00000006121 possible_ortholog 1 retrogene
retro_mluc_1118,
Macaca mulatta ENSMMUG00000011870 ortholog_one2one 7 retrogenes
retro_mmul_1831, retro_mmul_1846, retro_mmul_1929, retro_mmul_23, retro_mmul_2403, retro_mmul_2540, retro_mmul_357,
Otolemur garnettii ENSOGAG00000028165 possible_ortholog 1 retrogene
retro_ogar_133,
Pan troglodytes ENSPTRG00000011615 possible_ortholog 3 retrogenes
retro_ptro_202, retro_ptro_3132, retro_ptro_58,
Pteropus vampyrus ENSPVAG00000002071 possible_ortholog 7 retrogenes
retro_pvam_1051, retro_pvam_1183, retro_pvam_1330, retro_pvam_1437, retro_pvam_207, retro_pvam_543, retro_pvam_887,
Sus scrofa ENSSSCG00000027353 ortholog_one2one 5 retrogenes
retro_sscr_136, retro_sscr_137, retro_sscr_240, retro_sscr_364, retro_sscr_956,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_391 70.20 100.00
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2. retro_amel_914 74.62 99.48
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Download FASTA sequences of all ENSAMEG00000018435 retrocopies