Parental gene:

DENR, ENSACAG00000016012

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:LGb:2136996..2142606(-)


>ENSACAG00000016012
ATGGAGGCAGCTGAGTCGGTGATTGTCGATTCGAAAGGAGACCAAAGGTGCAACACCAGGCCAGACGCAGACTATCCTCT
CCGGGTCCTCTACTGCGGAGTTTGCTCATTGCCAACAGAGTACTGCGAATACATGCCCGACGTGTCAAAATGCAGGCAAT
GGCTAGAGAAGAATTTTCCAAACGAGTTTGCAAAACTTACTGTAGAAAAATCTCCCAAACAAGAATCTGGAATTGGAGAA
GGTCAAGGAATAACTGGTGAAGAGGAGGAGAAAAAAAAGCAAAAGAGAGGTGGAAGAGGTCAGATAAAACAGAAGAAGAA
AACGGTCCCTCAGAAAGTCACGATAGCAAAAATTCCAAGGGCAAAGAAGAAATATGTGACAAGAGTTTGTGGTCTCGCAA
CTTTTGAAATCGACCTTAAGGAAGCACAAAGATTCTTTGCTCAGAAGTTCTCTTGTGGTGCCTCAGTGACGGGAGAGGAT
GAAATAATAATTCAAGGGGACTTTACAGATGACATCATTGATGTCATCCAGGAAAAGTGGCCAGAGGTTGATGATGATAG
CATCGAAGATCTGGGAGAAGTCAAGAAGTGA

Library Parental gene expression (RPM)
SRP009831_adrenal 87 .86 RPM
SRP009831_brain 93 .69 RPM
SRP009831_dewlap 91 .12 RPM
SRP009831_embryo 103 .20 RPM
SRP009831_heart 64 .07 RPM
SRP009831_liver 40 .29 RPM
SRP009831_lung 36 .22 RPM
SRP009831_ovary 87 .91 RPM
SRP009831_skeletal_muscle 37 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000032433 ortholog_one2many 1 retrogene
retro_btau_110,
Callithrix jacchus ENSCJAG00000020488 ortholog_one2many 4 retrogenes
retro_cjac_1665, retro_cjac_2303, retro_cjac_2377, retro_cjac_2627,
Echinops telfairi ENSETEG00000013029 ortholog_one2one 1 retrogene
retro_etel_1127,
Homo sapiens ENSG00000139726 ortholog_one2one 4 retrogenes
retro_hsap_1028, retro_hsap_1854, retro_hsap_2471, retro_hsap_4313,
Gorilla gorilla ENSGGOG00000005562 ortholog_one2one 3 retrogenes
retro_ggor_2156, retro_ggor_2883, retro_ggor_813,
Myotis lucifugus ENSMLUG00000002088 ortholog_one2one 1 retrogene
retro_mluc_2450,
Nomascus leucogenys ENSNLEG00000002186 ortholog_one2one 3 retrogenes
retro_nleu_1465, retro_nleu_2136, retro_nleu_906,
Oryctolagus cuniculus ENSOCUG00000008150 ortholog_one2many 2 retrogenes
retro_ocun_1325, retro_ocun_1524,
Ochotona princeps ENSOPRG00000015974 ortholog_one2one 5 retrogenes
retro_opri_1000, retro_opri_1139, retro_opri_1147, retro_opri_133, retro_opri_183,
Pongo abelii ENSPPYG00000005073 ortholog_one2one 3 retrogenes
retro_pabe_1821, retro_pabe_3509, retro_pabe_861,
Pan troglodytes ENSPTRG00000005584 ortholog_one2one 4 retrogenes
retro_ptro_1236, retro_ptro_2921, retro_ptro_2955, retro_ptro_703,
Sorex araneus ENSSARG00000004446 ortholog_one2one 4 retrogenes
retro_sara_118, retro_sara_125, retro_sara_523, retro_sara_722,
Sus scrofa ENSSSCG00000009788 ortholog_one2one 1 retrogene
retro_sscr_1145,
Tursiops truncatus ENSTTRG00000015856 ortholog_one2one 1 retrogene
retro_ttru_745,
Vicugna pacos ENSVPAG00000011472 ortholog_one2one 1 retrogene
retro_vpac_139,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_71 75.70 54.08
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Download FASTA sequences of all ENSACAG00000016012 retrocopies