Parental gene: | BGIOSGA007827 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 2:8063727..8068427(+) |
>BGIOSGA007827
ATGGCGGGATCTTTCGTCGCGGTCAGGGGGAAGCCTCGGTCGTCCCCGAAGCGGAGCGGCGGCGGCGGCGCGGATCCGCC
CTTGTCTCTGGCCATGCCGACCGTCGCCGATCTCCACAAGACGGCTGAGTTGGAGAAGTTCTTGGTTGAAGCCGGCCTTT
ATGAAGGGGAGGAGGAGTCCGCGAAACGGGAGGAGGTTCTTCGGGAGATTGATCAGATAGTCAAGGAATGGGTGAAGAAG
GTCACTATTCAGAAAGGATATAGTGAGCAAATGGTTAAAGAGGCAAATGCAGTCCTTTTCACTTTTGGATCTTACAGACT
GGGGGTTCATGGGCCTGGAGCAGACATTGATGCACTATGTATTGGACCCTCCTATGTGAAACGAGAGGAGGAATTTTTTG
TCACGCTATATGGCGCATTATCAGAAATGGAAGAAGTGACTGAACTGCAACCTGTACCTGATGCTCATGTACCAGTTATG
AAATTCAAGTTTCGTGGGCTACCAATTGACCTTCTCTATGCCAGTGTATCTCTTCCAGTAATACCACCAGATTTTGACAT
CTCTCAAGGATCTGTACTTTGTGATGTTGATGAAGCAACTGTTCGAAGTCTCAATGGGTGCAGGGTGGCAGACCAGATTC
TTCGACTTGTTCCAAATGCGGAGATCTTCCGGAAAACACTCAGATGTTTGAAGTACTGGGCACAGAGAAGAGGAGTTTAT
TCTAATGTTACTGGTTTGCTGGGGGGTGTCAGCTGGGCCCTATTGGTTGCTCGTGTCTGCCAACTTTATCCCAATGCTGT
GCCAAGTATGCTGGTTTCAAGATTCTTCAGAGTTTTCACCCAGTGGCAGTGGCCAAATCCTGTGATGCTTTGTGCCATTG
AGAACGATGATAACCTTGGCTTTGCTGTGTGGGATCCACGTAAGAATCCTCGTGATAGATCACATGTTATGCCTATCATC
ACGCCAGCATATCCATGCATGAACTCTAGTTACAATGTTTCAACTAGCACATTGAGGGTTATTATGGAGCAATTTCAGTT
TGGTAATAAGATTTGTCAGGAAATTGAGCTTAACAAGGCTAGCTGGAGTTCTTTGTTTGAGCCTTTCCAATTTTTCGAGG
CATATACAAGATATCTAGTGGTTGACATTGTTGCAGATGATGATGATGATCTTCGGCTTTGGAAGGGATGGATTGAATCT
CGATTGAGACAGCTGACTCTAAAGATTGAGCGGGACACTAAAGGGATGCTGCAATGCCATCCTAACCCATGTGAATATGC
AGATCCTTCAATACAGTGTGCTCACTGTGCCTTCTACATGGGCTTATCAAGGAAAGAGGGAATGAAAATACGTGGTCAAA
AATTTGATATCCGTGGAACAGTAGACGAGTTTATGCATGAAATTGGAATGTATACACAGTGGAAATCCGGGATGGATCTA
GCTGTCACTCATGTCTGTAAGAAGGAGATCCCCCTTTATGTATTTGAACAGGGCTGCCAGAAAACTCGTCCACCAACGCC
AATATGTGCAGAGCAGCAAGACCAGTCTGATAAAAATGACTCTGAAGTTTGCACAACGACAGCATCTCTGGTGGGTCAGC
TCAAGCGAAAGTATCATTCTGTTGGAGGTGCTGACGTTGACTCATTCAAATCTGTTAGAAGGGCTTCAGTTAGCCCGGCT
TGTGAGGAAGCATCAATTCAGTTGCATGATGATGCAAATTTTGGACTGACTAATTGCTCCACTTCACCACATGGATCTGA
GGGGTCCACTGTATCAGGCAACAGCTGTGCAGCAGTTGGCACTATTGGTTTGGTTGATGAAACTAGCTTACCTGGCTGCT
TGATGCCCAATGTTGAAAATGATCCAATTCGAACAATTTTAGAGCAGGCGCCTTCAGAAAGTGTGGTTGAGAAGGATGAA
AGAAAACTAGAAGGAATTGAAAGCTTGGCAAGTAGCAACTGTACTGAATTCATGGAGGTTGCAGAAGTGGTCACTGGGAC
GATCCTTACTGAGAATGGTGATATACGCTTAAGTGGACATGAAGTGATCTGA
ATGGCGGGATCTTTCGTCGCGGTCAGGGGGAAGCCTCGGTCGTCCCCGAAGCGGAGCGGCGGCGGCGGCGCGGATCCGCC
CTTGTCTCTGGCCATGCCGACCGTCGCCGATCTCCACAAGACGGCTGAGTTGGAGAAGTTCTTGGTTGAAGCCGGCCTTT
ATGAAGGGGAGGAGGAGTCCGCGAAACGGGAGGAGGTTCTTCGGGAGATTGATCAGATAGTCAAGGAATGGGTGAAGAAG
GTCACTATTCAGAAAGGATATAGTGAGCAAATGGTTAAAGAGGCAAATGCAGTCCTTTTCACTTTTGGATCTTACAGACT
GGGGGTTCATGGGCCTGGAGCAGACATTGATGCACTATGTATTGGACCCTCCTATGTGAAACGAGAGGAGGAATTTTTTG
TCACGCTATATGGCGCATTATCAGAAATGGAAGAAGTGACTGAACTGCAACCTGTACCTGATGCTCATGTACCAGTTATG
AAATTCAAGTTTCGTGGGCTACCAATTGACCTTCTCTATGCCAGTGTATCTCTTCCAGTAATACCACCAGATTTTGACAT
CTCTCAAGGATCTGTACTTTGTGATGTTGATGAAGCAACTGTTCGAAGTCTCAATGGGTGCAGGGTGGCAGACCAGATTC
TTCGACTTGTTCCAAATGCGGAGATCTTCCGGAAAACACTCAGATGTTTGAAGTACTGGGCACAGAGAAGAGGAGTTTAT
TCTAATGTTACTGGTTTGCTGGGGGGTGTCAGCTGGGCCCTATTGGTTGCTCGTGTCTGCCAACTTTATCCCAATGCTGT
GCCAAGTATGCTGGTTTCAAGATTCTTCAGAGTTTTCACCCAGTGGCAGTGGCCAAATCCTGTGATGCTTTGTGCCATTG
AGAACGATGATAACCTTGGCTTTGCTGTGTGGGATCCACGTAAGAATCCTCGTGATAGATCACATGTTATGCCTATCATC
ACGCCAGCATATCCATGCATGAACTCTAGTTACAATGTTTCAACTAGCACATTGAGGGTTATTATGGAGCAATTTCAGTT
TGGTAATAAGATTTGTCAGGAAATTGAGCTTAACAAGGCTAGCTGGAGTTCTTTGTTTGAGCCTTTCCAATTTTTCGAGG
CATATACAAGATATCTAGTGGTTGACATTGTTGCAGATGATGATGATGATCTTCGGCTTTGGAAGGGATGGATTGAATCT
CGATTGAGACAGCTGACTCTAAAGATTGAGCGGGACACTAAAGGGATGCTGCAATGCCATCCTAACCCATGTGAATATGC
AGATCCTTCAATACAGTGTGCTCACTGTGCCTTCTACATGGGCTTATCAAGGAAAGAGGGAATGAAAATACGTGGTCAAA
AATTTGATATCCGTGGAACAGTAGACGAGTTTATGCATGAAATTGGAATGTATACACAGTGGAAATCCGGGATGGATCTA
GCTGTCACTCATGTCTGTAAGAAGGAGATCCCCCTTTATGTATTTGAACAGGGCTGCCAGAAAACTCGTCCACCAACGCC
AATATGTGCAGAGCAGCAAGACCAGTCTGATAAAAATGACTCTGAAGTTTGCACAACGACAGCATCTCTGGTGGGTCAGC
TCAAGCGAAAGTATCATTCTGTTGGAGGTGCTGACGTTGACTCATTCAAATCTGTTAGAAGGGCTTCAGTTAGCCCGGCT
TGTGAGGAAGCATCAATTCAGTTGCATGATGATGCAAATTTTGGACTGACTAATTGCTCCACTTCACCACATGGATCTGA
GGGGTCCACTGTATCAGGCAACAGCTGTGCAGCAGTTGGCACTATTGGTTTGGTTGATGAAACTAGCTTACCTGGCTGCT
TGATGCCCAATGTTGAAAATGATCCAATTCGAACAATTTTAGAGCAGGCGCCTTCAGAAAGTGTGGTTGAGAAGGATGAA
AGAAAACTAGAAGGAATTGAAAGCTTGGCAAGTAGCAACTGTACTGAATTCATGGAGGTTGCAGAAGTGGTCACTGGGAC
GATCCTTACTGAGAATGGTGATATACGCTTAAGTGGACATGAAGTGATCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza rufipogon | ORUFI02G09480 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0227400 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_15 | 59.32 | 59.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA007827 retrocopies