Parental gene:

sri, ENSXETG00000008793

Aliases:None
Description:sorcin [Source:Jamboree;Acc:XB-GENE-952117]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL172740.1:910111..919570(+)


>ENSXETG00000008793
ATGGCGTATCCGGGACAGCAGCCAGGAGGCTATTACCAAGGAGGGTATGGCGGAGCCCCCGGGGGTCCTGCATATGGTCA
GCAGCAAGACCCCATGTATGGCTACTTTGCATCTATTGCCGGCCAGGATGGCCAGATTGATGCTGATGAGCTACAGCGGT
GCCTCACACAAGCAGGGCTCTCTGGGGGATACAAACCTTTTAGTCTGGAAACTTGCCGACTTATGATCGCTATGCTGGAT
AGGGACATGTCTGGCAAAATGGGCTTTAATGAATTTAAAGAACTGGGGATGGTAATAAATGGTTGGAGACAGCACTTCAT
GACGTATGATGGTGATAGGAGCGGCACAGTTGAGGGGCATGAACTTCACGCCGCTTTAGGAGCAATGGGGTATCGGTTGA
GCCCCCAGGCGCTGAATAATATAGCAAAGAGATACAGCACAAATGGAAGAATCTCTTTTGATGACTACATTACCTGCTGT
GTGAAACTGCGAGCTCTGACAGACATGTTCAGGAGGAGGGATGTTTCCCAACAGGGTGTAGTGAACTTCCAGTATGATGA
TTTTATTCAAAGTGTCATGTCCATATAA

Library Parental gene expression (RPM)
SRP007412_brain 29 .36 RPM
SRP007412_heart 32 .91 RPM
SRP007412_kidney 32 .91 RPM
SRP007412_liver 48 .66 RPM
SRP007412_skeletal_muscle 9 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001855 ortholog_one2one 1 retrogene
retro_cfam_498,
Cavia porcellus ENSCPOG00000010096 ortholog_one2one 1 retrogene
retro_cpor_216,
Latimeria chalumnae ENSLACG00000000210 ortholog_one2one 1 retrogene
retro_lcha_89,
Loxodonta africana ENSLAFG00000027380 ortholog_one2one 2 retrogenes
retro_lafr_1186, retro_lafr_487,
Monodelphis domestica ENSMODG00000010355 ortholog_one2one 1 retrogene
retro_mdom_782,
Mustela putorius furo ENSMPUG00000018313 ortholog_one2one 1 retrogene
retro_mputfur_1147,
Pteropus vampyrus ENSPVAG00000007438 ortholog_one2one 2 retrogenes
retro_pvam_1112, retro_pvam_734,
Rattus norvegicus ENSRNOG00000049780 ortholog_one2one 1 retrogene
retro_rnor_1237,
Ictidomys tridecemlineatus ENSSTOG00000004372 ortholog_one2one 1 retrogene
retro_itri_607,
Tupaia belangeri ENSTBEG00000004434 ortholog_one2one 1 retrogene
retro_tbel_4493,
Tarsius syrichta ENSTSYG00000014640 ortholog_one2many 1 retrogene
retro_tsyr_1832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_25 62.30 60.51
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Download FASTA sequences of all ENSXETG00000008793 retrocopies