Parental gene:

SRI, ENSCPOG00000010096

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_11:19888841..19900655(-)


>ENSCPOG00000010096
ATGGCGTATCCCGGACACCCCGGTGCGGGCGGCGGCTACTACCCAGGCGGGTTCGGAGGGGCGCCCGGAGGCCCGGCCTT
TCCCGCGCAGACGCAGGACCCGCAGTATGGCTACTTCGCCGCGGTGGCTGGACAGGATGGGCAAATAGATGCTGATGAAT
TACAGAGATGTCTAACACAGTCAGGCATTGCAGGAGGATACAAACCTTTTAATCTGGAAACTTGTCGGCTTATGGTTTCA
ATGCTGGATAAAGATATGTCTGGTACCATGGGCTTCACGGAGTTCAAGGAGCTCTGGTCTGTGCTGAACGGCTGGAAGCA
GCACTTCACCAGCTTCGACAGTGACCGCAGCGGGACTGTGGACCCTCAGGAGCTGCACAAGGCACTGACCACCATGGGGT
TTAGGTTAAATCCACAGACTGTGAATTTGATCGCGAGACGCTACAGCACCAATAGGAGGATCACTTTTGACGACTACATC
GCGTGCTGTGTGAAGCTGCGGGCGCTCACAGATAGCTTTCGAAGACGGGATTCTGGTCAGCAGGGTGTTGTGAATTTCTC
ATATGATGATTTCATTCAGTGTGTCATGACTGTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 38 .42 RPM
SRP017611_kidney 73 .07 RPM
SRP017611_liver 45 .62 RPM
SRP040447_lung 64 .92 RPM
SRP040447_skeletal_muscle 16 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001855 ortholog_one2one 1 retrogene
retro_cfam_498,
Latimeria chalumnae ENSLACG00000000210 ortholog_one2one 1 retrogene
retro_lcha_89,
Loxodonta africana ENSLAFG00000027380 ortholog_one2one 2 retrogenes
retro_lafr_1186, retro_lafr_487,
Monodelphis domestica ENSMODG00000010355 ortholog_one2one 1 retrogene
retro_mdom_782,
Mustela putorius furo ENSMPUG00000018313 ortholog_one2one 1 retrogene
retro_mputfur_1147,
Pteropus vampyrus ENSPVAG00000007438 ortholog_one2one 2 retrogenes
retro_pvam_1112, retro_pvam_734,
Rattus norvegicus ENSRNOG00000049780 ortholog_one2one 1 retrogene
retro_rnor_1237,
Ictidomys tridecemlineatus ENSSTOG00000004372 ortholog_one2one 1 retrogene
retro_itri_607,
Tupaia belangeri ENSTBEG00000004434 ortholog_one2one 1 retrogene
retro_tbel_4493,
Tarsius syrichta ENSTSYG00000014640 ortholog_one2many 1 retrogene
retro_tsyr_1832,
Xenopus tropicalis ENSXETG00000008793 ortholog_one2one 1 retrogene
retro_xtro_25,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_216 54.40 60.61
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Download FASTA sequences of all ENSCPOG00000010096 retrocopies