Parental gene:

ENSVPAG00000009523

Aliases:None
Description:None
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_873:420428..425612(+)


>ENSVPAG00000009523
GTACTTCGGTCTTTGGTGGAAGCATCCTGCTCAGGTGTGTCAGTACTGAGCCTGTGTGAAAAAGGTGATGCCATGATAAT
GGAAGAGACGGGGAAAATTTTCAAGAAAGAAAAAGAAATGAAGAAAGGTATTGCCTTTCCCACCAGCATTTCAGTAAATA
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAACACACAAGTGACAGAAGCGTGGAACAAAGTTGCCCACTCATTTAATTGCACACCAATAGAAGGTATGCTGTCAC
ACCAATTGAAGCAGCATGTCATCGACGGAGAGAAAACTATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATGAA
AAAGCTGAATTTGAGGTCCATGAAGTATATGCTGTGGATGTTCTTGTCAGCTCTGGAGAGGGCAAGGCTAAGGACGCAGG
ACAGAGAACCACCATTTACAAACGAGACCCTTCTAAGCAGTATGGCCTGAAAATGAAAACTTCACGTGCCTTCTTCAGTG
AGGTCGAAAGACGTTTTGATGCCATGCCCTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCCCGCATGGGTGTGGTG
GAGTGCGCCAAACATGAGCTGCTGCAGCCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAATT
TACAGTTCTACTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTTGAGCCTGACCTTTATAAGTCCGAGTTGG
AGGTCCAGGATGCAGAGCTCAAGGCCCTCCTCCAGAGTTCTGCAAGTCGGAAAACCCAGAAAAAGAAAAAAAAGAAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007181 ortholog_one2many 2 retrogenes
retro_chof_1089, retro_chof_1847,
Callithrix jacchus ENSCJAG00000011811 ortholog_one2one 2 retrogenes
retro_cjac_4214, retro_cjac_4215,
Homo sapiens ENSG00000170515 possible_ortholog 6 retrogenes
retro_hsap_1930, retro_hsap_2413, retro_hsap_2868, retro_hsap_3646, retro_hsap_4191, retro_hsap_4895,
Macaca mulatta ENSMMUG00000002164 possible_ortholog 2 retrogenes
retro_mmul_1168, retro_mmul_2631,
Mus musculus ENSMUSG00000025364 possible_ortholog 1 retrogene
retro_mmus_2803,
Nomascus leucogenys ENSNLEG00000017544 possible_ortholog 6 retrogenes
retro_nleu_1212, retro_nleu_1260, retro_nleu_163, retro_nleu_3024, retro_nleu_506, retro_nleu_612,
Oryctolagus cuniculus ENSOCUG00000017342 possible_ortholog 1 retrogene
retro_ocun_1733,
Pongo abelii ENSPPYG00000025851 possible_ortholog 7 retrogenes
retro_pabe_1595, retro_pabe_1778, retro_pabe_2375, retro_pabe_2869, retro_pabe_2993, retro_pabe_3430, retro_pabe_3807,
Pan troglodytes ENSPTRG00000005076 ortholog_one2one 6 retrogenes
retro_ptro_1289, retro_ptro_1389, retro_ptro_1940, retro_ptro_2471, retro_ptro_2846, retro_ptro_3263,
Sus scrofa ENSSSCG00000000377 possible_ortholog 1 retrogene
retro_sscr_338,
Sus scrofa ENSSSCG00000022666 possible_ortholog 2 retrogenes
retro_sscr_1143, retro_sscr_337,
Tarsius syrichta ENSTSYG00000006777 possible_ortholog 1 retrogene
retro_tsyr_746,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_2 91.94 58.31
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Download FASTA sequences of all ENSVPAG00000009523 retrocopies