Parental gene: | PA2G4, ENSG00000170515 |
| Aliases: | PA2G4, EBP1, HG4-1, p38-2G4 |
| Description: | proliferation-associated 2G4, 38kDa [Source:HGNC Symbol;Acc:8550] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:56498102..56507691(+) |
>ENSG00000170515
ATGTCGGGCGAGGACGAGCAACAGGAGCAAACTATCGCTGAGGACCTGGTCGTGACCAAGTATAAGATGGGGGGCGACAT
CGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCAGGTGTGTCGGTACTGAGCCTGTGTGAGAAAGGTGATG
CCATGATTATGGAAGAAACAGGGAAAATCTTCAAGAAAGAAAAGGAAATGAAGAAAGGTATTGCTTTTCCCACCAGCATT
TCGGTAAATAACTGTGTATGTCACTTCTCCCCTTTGAAGAGCGACCAGGATTATATTCTCAAGGAAGGTGACTTGGTAAA
AATTGACCTTGGGGTCCATGTGGATGGCTTCATCGCTAATGTAGCTCACACTTTTGTGGTTGATGTAGCTCAGGGGACCC
AAGTAACAGGGAGGAAAGCAGATGTTATTAAGGCAGCTCACCTTTGTGCTGAAGCTGCCCTACGCCTGGTCAAACCTGGA
AATCAGAACACACAAGTGACAGAAGCCTGGAACAAAGTTGCCCACTCATTTAACTGCACGCCAATAGAAGGTATGCTGTC
ACACCAGTTGAAGCAGCATGTCATCGATGGAGAAAAAACCATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATG
AAAAAGCTGAATTTGAGGTACATGAAGTATATGCTGTGGATGTTCTCGTCAGCTCAGGAGAGGGCAAGGCCAAGGATGCA
GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACAGTATGGACTGAAAATGAAAACTTCACGTGCCTTCTTCAG
TGAGGTGGAAAGGCGTTTTGATGCCATGCCGTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCTCGGATGGGTGTGG
TGGAGTGCGCCAAACATGAACTGCTGCAACCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAA
TTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTCGAGCCTGACCTCTACAAGTCTGAGAT
GGAGGTCCAGGATGCAGAGCTAAAGGCCCTCCTCCAGAGTTCTGCAAGTCGAAAAACCCAGAAAAAGAAAAAAAAGAAGG
CCTCCAAGACTGCAGAGAATGCCACCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 102 .89 RPM |
| bodymap2_adrenal | 101 .45 RPM |
| bodymap2_brain | 71 .63 RPM |
| bodymap2_breast | 69 .57 RPM |
| bodymap2_colon | 128 .02 RPM |
| bodymap2_heart | 41 .59 RPM |
| bodymap2_kidney | 64 .89 RPM |
| bodymap2_liver | 50 .34 RPM |
| bodymap2_lung | 93 .58 RPM |
| bodymap2_lymph_node | 72 .80 RPM |
| bodymap2_ovary | 115 .14 RPM |
| bodymap2_prostate | 106 .95 RPM |
| bodymap2_skeletal_muscle | 129 .57 RPM |
| bodymap2_testis | 110 .08 RPM |
| bodymap2_thyroid | 95 .53 RPM |
| bodymap2_white_blood_cells | 78 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007181 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011811 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000002164 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000025364 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017544 | ortholog_one2one | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017342 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025851 | ortholog_one2one | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000005076 | possible_ortholog | 6 retrogenes | |
| Sus scrofa | ENSSSCG00000000377 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022666 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006777 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000009523 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1930 | 83.71 | 77.46 | Please wait, loading  |
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| 2. | retro_hsap_2413 | 90.38 | 87.06 | Please wait, loading |
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| 3. | retro_hsap_2868 | 94.44 | 100.00 | Please wait, loading |
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| 4. | retro_hsap_3646 | 87.34 | 100.00 | Please wait, loading |
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| 5. | retro_hsap_4191 | 88.04 | 93.15 | Please wait, loading |
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| 6. | retro_hsap_4895 | 88.50 | 85.79 | Please wait, loading |
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Download FASTA sequences of all ENSG00000170515 retrocopies