Parental gene:

RPL13A, ENSTBEG00000016579

Aliases:None
Description:ribosomal protein L13a [Source:HGNC Symbol;Acc:10304]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2860:4539..8200(+)


>ENSTBEG00000016579
ATGGCGGAGGGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGACCGCCTCAAGGTGTTCGACGG
GATCCCGCCACCCTATGATAAGAAAAAGCGGATGGTGGTGCCTGCTGCTCTCAAGGTTGTGCGGCTGAAGCCTACAAGGA
AGTTTGCCTACCTGGGGCGCCTGGCTCATGAGGTCGGCTGGAAGTACCAGGCAGTGACGGCCACCCTGGAGGAGAAGAGG
AAGGAGAAAGCCAAGATGCACTACCGGAAGAAGAAACAGCTCATGAGGCTACGGAAACAGGCCGAAAAGAATGTGGAGAA
GAAAATTGGCAAATACACAGAGGTCCTCAAGACCCATGGACTCCTGGTCTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005296 possible_ortholog 3 retrogenes
retro_btau_1251, retro_btau_719, retro_btau_789,
Canis familiaris ENSCAFG00000029892 possible_ortholog 3 retrogenes
retro_cfam_1772, retro_cfam_924, retro_cfam_976,
Callithrix jacchus ENSCJAG00000000072 possible_ortholog 16 retrogenes
retro_cjac_1130, retro_cjac_1706, retro_cjac_182, retro_cjac_197, retro_cjac_1997, retro_cjac_2170, retro_cjac_2322, retro_cjac_2467, retro_cjac_2468, retro_cjac_2665, retro_cjac_2699, retro_cjac_2755, retro_cjac_3009, retro_cjac_664, retro_cjac_941, retro_cjac_972,
Echinops telfairi ENSETEG00000017076 possible_ortholog 2 retrogenes
retro_etel_46, retro_etel_853,
Loxodonta africana ENSLAFG00000016213 ortholog_one2one 3 retrogenes
retro_lafr_1160, retro_lafr_576, retro_lafr_810,
Mus musculus ENSMUSG00000074129 possible_ortholog 3 retrogenes
retro_mmus_1129, retro_mmus_1334, retro_mmus_20,
Pteropus vampyrus ENSPVAG00000010958 ortholog_one2one 3 retrogenes
retro_pvam_129, retro_pvam_625, retro_pvam_771,
Rattus norvegicus ENSRNOG00000020618 possible_ortholog 10 retrogenes
retro_rnor_1073, retro_rnor_1112, retro_rnor_1212, retro_rnor_1292, retro_rnor_1357, retro_rnor_1742, retro_rnor_564, retro_rnor_593, retro_rnor_665, retro_rnor_988,
Sus scrofa ENSSSCG00000003166 possible_ortholog 4 retrogenes
retro_sscr_290, retro_sscr_300, retro_sscr_392, retro_sscr_743,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_958 69.81 51.23
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2. retro_tbel_2417 86.79 51.23
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3. retro_tbel_4071 83.65 51.23
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Download FASTA sequences of all ENSTBEG00000016579 retrocopies