Parental gene:

PARK7, ENSTBEG00000009474

Aliases:None
Description:parkinson protein 7 [Source:HGNC Symbol;Acc:16369]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_230:42599..62953(+)


>ENSTBEG00000009474
ATGGCTTCAAAAAGAGCTTTGGTCATCCTGGCTAAAGGAGCAGAGGAAATGGAGACGGTCATCCCTGTAGACGTCATGAG
GCGAGCTGGGATTAAGGTCACTGTTGCTGGCCTGGCTGGAAAAGACCCAGTGCAGTGTAGTCGTGATGTTGTCATTTGTC
CTGATGCCAGTCTCGAAGATGCAAAAAAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTCCGCTGCCGTGAAAGAGATCCTGAAGGAGCAGGAAAAGCGGAAGGGCCTCATAGCCGCCATCTGTGC
AGGTCCTACCGCCCTGTTGGCTCATGAAATAGGCTTTGGAAGCAAAGTTACAACACACCCACTTGCTAAAGACAAAATGA
TGAATGGAAGTCATTACACCTACTCTGAGAATCGTGTGGAAAAGGATGGTCTGATTCTTACAAGCCGTGGTCCTGGGACC
AGCTTCGAATTTGCTCTCGCGATTGTTGAGGCGCTGAGCGGCAAGGAGGTGGCCGACCAAGTGAAGGCTCCACTTGTTCT
TAAAGATTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003703 ortholog_one2one 1 retrogene
retro_amel_854,
Canis familiaris ENSCAFG00000019674 ortholog_one2one 1 retrogene
retro_cfam_1150,
Choloepus hoffmanni ENSCHOG00000004364 ortholog_one2one 7 retrogenes
retro_chof_1725, retro_chof_1877, retro_chof_2047, retro_chof_2123, retro_chof_2220, retro_chof_279, retro_chof_63,
Callithrix jacchus ENSCJAG00000000319 ortholog_one2many 4 retrogenes
retro_cjac_1348, retro_cjac_2729, retro_cjac_3210, retro_cjac_4225,
Erinaceus europaeus ENSEEUG00000013141 ortholog_one2one 1 retrogene
retro_eeur_233,
Echinops telfairi ENSETEG00000010915 ortholog_one2one 1 retrogene
retro_etel_215,
Homo sapiens ENSG00000116288 ortholog_one2one 2 retrogenes
retro_hsap_4195, retro_hsap_995,
Gorilla gorilla ENSGGOG00000012105 ortholog_one2one 2 retrogenes
retro_ggor_2812, retro_ggor_795,
Microcebus murinus ENSMICG00000008470 ortholog_one2one 2 retrogenes
retro_mmur_1294, retro_mmur_690,
Nomascus leucogenys ENSNLEG00000008790 ortholog_one2one 3 retrogenes
retro_nleu_1025, retro_nleu_2320, retro_nleu_233,
Oryctolagus cuniculus ENSOCUG00000016511 ortholog_one2one 1 retrogene
retro_ocun_1405,
Ochotona princeps ENSOPRG00000002151 ortholog_one2one 2 retrogenes
retro_opri_104, retro_opri_1173,
Pongo abelii ENSPPYG00000001925 ortholog_one2one 2 retrogenes
retro_pabe_3433, retro_pabe_840,
Pan troglodytes ENSPTRG00000000102 ortholog_one2one 3 retrogenes
retro_ptro_2848, retro_ptro_3270, retro_ptro_755,
Rattus norvegicus ENSRNOG00000018289 ortholog_one2many 2 retrogenes
retro_rnor_1229, retro_rnor_2463,
Tarsius syrichta ENSTSYG00000001455 ortholog_one2one 1 retrogene
retro_tsyr_1883,
Vicugna pacos ENSVPAG00000011076 ortholog_one2one 1 retrogene
retro_vpac_364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_220 71.43 100.00
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2. retro_tbel_561 78.10 55.03
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3. retro_tbel_1182 75.00 71.43
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4. retro_tbel_1306 75.89 74.07
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5. retro_tbel_1405 68.61 72.49
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6. retro_tbel_1790 95.24 55.56
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7. retro_tbel_2059 75.14 96.30
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8. retro_tbel_2247 86.41 52.91
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9. retro_tbel_2551 82.61 97.35
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10. retro_tbel_3013 81.52 97.35
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11. retro_tbel_4047 76.64 55.56
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12. retro_tbel_4486 81.38 99.47
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13. retro_tbel_4538 79.14 73.54
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Download FASTA sequences of all ENSTBEG00000009474 retrocopies