Parental gene:

RBBP4, ENSTBEG00000002236

Aliases:None
Description:retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3699:40042..51822(+)


>ENSTBEG00000002236
CCTGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACCTCGGATGAGCAAAACCACCTGGTGATAGC
CAGCGTGCAGCTCCCTAACGATGATGCTCAGTTTGATGCGTCACACTACGACAGCGAGAAAGGAGAATTTGGAGGTTTTG
GCTCAGTTAGTGGGAAAATCGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTGAACAGGGCTCGTTATATGCCCCAG
AACCCTTGTATCATTGCAACAAAGACTCCATCGAGCGACGTGCTTGTTTTCGACTATACAAAGCATCCTTCTAAGCCAGA
CCCTTCTGGAGAGTGCAACCCGGACTTGCGTCTCCGTGGACACCAGAAGGAAGGCTATGGGCTTTCTTGGAACCCGAATC
TCAGTGGGCACTTACTTAGTGCTTCCGATGACCACACCATCTGCCTGTGGGACATCAGTGCCGTTCCGAAGGAAGGCAAA
GTGGTGGATGCAAAGACCATCTTTACGGGGCACACGGCGGTGGTGGAAGATGTCTCCTGGCATCTGCTCCATGAGTCTCT
CTTTGGATCAGTTGCTGATGATCAGAAACTTATGATATGGGATACGCGTTCAAACAATACTTCCAAACCTAGCCACTCAG
CTGATGCCCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAATTCATCCATGCCACAGGGTCGGCTGAC
AAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTCAGTGGTCACCTCACAATGAGACTATTTTGGCTTCCAGCGGTACTGACCGCAGACTAAATGTCTGGGATTTAAGTA
AAATTGGAGAGGAACAGTCGCCAGAAGATGCGGAGGATGGGCCACCAGAGTTGTTGTTTATTCATGGCGGTCACACTGCC
AAGATATCCGATTTCTCGTGGAATCCCAACGAACCTTGGGTGATTTGCTCTGTATCAGAAGACAATATCATGCAGGTGTG
GCAGATG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001021 possible_ortholog 7 retrogenes
retro_cjac_1157, retro_cjac_1787, retro_cjac_1873, retro_cjac_244, retro_cjac_2557, retro_cjac_2719, retro_cjac_2939,
Cavia porcellus ENSCPOG00000015352 possible_ortholog 3 retrogenes
retro_cpor_154, retro_cpor_27, retro_cpor_899,
Gorilla gorilla ENSGGOG00000011313 ortholog_one2one 4 retrogenes
retro_ggor_1022, retro_ggor_1314, retro_ggor_1867, retro_ggor_2428,
Macaca mulatta ENSMMUG00000009940 possible_ortholog 1 retrogene
retro_mmul_75,
Mustela putorius furo ENSMPUG00000015214 possible_ortholog 1 retrogene
retro_mputfur_104,
Otolemur garnettii ENSOGAG00000011632 ortholog_one2one 2 retrogenes
retro_ogar_3079, retro_ogar_3297,
Petromyzon marinus ENSPMAG00000007189 ortholog_one2many 1 retrogene
retro_pmar_26,
Rattus norvegicus ENSRNOG00000021492 possible_ortholog 1 retrogene
retro_rnor_1270,
Sarcophilus harrisii ENSSHAG00000010923 possible_ortholog 1 retrogene
retro_shar_399,
Tupaia belangeri ENSTBEG00000010151 within_species_paralog 2 retrogenes
retro_tbel_3031, retro_tbel_4341,
Vicugna pacos ENSVPAG00000011876 ortholog_one2one 4 retrogenes
retro_vpac_333, retro_vpac_419, retro_vpac_652, retro_vpac_94,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_1360 84.02 69.05
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2. retro_tbel_1718 90.05 60.17
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3. retro_tbel_3802 78.28 69.05
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Download FASTA sequences of all ENSTBEG00000002236 retrocopies