Parental gene: | RBBP4, ENSVPAG00000011876 |
| Aliases: | None |
| Description: | retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887] |
| Organism: | Alpaca (Vicugna pacos) |
| Coordinates: | GeneScaffold_2243:255234..274676(+) |
>ENSVPAG00000011876
ATGGCCGACAAGGAAGCAGCCTTTGATGACGCAGTAGAGGAACGTGTGATCAACGAAGAGTACAAAATATGGAAAAAGAA
CACCCTTTTTCTTTACGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTAACTGCACAGTGGCTTCCAGATGTAA
CCAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACATCGGATGAACAGAACCACCTTGTG
ATAGCCAGCGTGCAGCTCCCTAATGATGATGCTCAGTTTGATGCTTCACACTACGACAGTGAAAAAGGAGAATTCGGAGG
TTTTGGCTCAGTTAGTGGAAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGAGCACGTTATATGC
CCCAGAACCCTTGCATCATTGCAACAAAGACTCCATCCAGTGATGTTCTTGTTTTTGACTATACGAAACATCCTTCTAAA
CCAGACCCTTCTGGAGAGTGCAACCCAGACTTGCGTCTCCGTGGACATCAGAAGGAAGGCTATGGGCTTTCTTGGAACCC
AAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGACCATACCATCTGCCTATGGGACATCAGTGCTGTTCCAAAGGAAG
GTAAAGTTGTGGATGCGAAGACCATCTTTACAGGGCATACAGCAGTAGTAGAAGACGTCTCTTGGCATCTGCTCCATGAG
TCTCTGTTTGGGTCAGTTGCTGATGATCAGAAACTTATGATCTGGGATACTCGTTCAAACAATACTTCGAAACCAAGCCA
CTCAGTTGATGCTCACACTGCTGAAGTGAACTGCCTTTCTTTCAATCCATATAGTGAGTTCATTCTTGCCACAGGATCAG
CTGACAAGACTGTTGCCTTGTGGGATCTGAGAAATCTGAAACTGAAGTTGCATTCCTTTGAATCACATAAGGATGAAATA
TTCCAGNNNCAGTGGTCACCTCACAATGAGACTATTTTGGCTTCTAGTGGTACTGATCGCAGGCTGAATGTCTGGGATTT
AAGTAAAATTGGAGAGGAACAGTCTCCAGAAGATGCAGAAGATGGGCCACCAGAGTTGTTGTTTATTCATGGTGGTCACA
CTGCCAAGATATCTGATTTCTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGATAATATCATGCAA
GTGTGGCAAATGGCAGAGAACATTTATAATGATGAAGACCCCGAAGGAAGTGTGGATCCAGAAGGACAAGGGTCGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001021 | possible_ortholog | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000015352 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011313 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000009940 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015214 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011632 | ortholog_one2one | 2 retrogenes | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021492 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010923 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002236 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_vpac_94 | 96.24 | 100.00 | Please wait, loading  |
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| 2. | retro_vpac_333 | 96.96 | 77.41 | Please wait, loading |
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| 3. | retro_vpac_419 | 93.51 | 61.65 | Please wait, loading |
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| 4. | retro_vpac_652 | 87.71 | 70.35 | Please wait, loading |
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Download FASTA sequences of all ENSVPAG00000011876 retrocopies