Parental gene:

ENSTBEG00000000391

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_6054:6218..9743(-)


>ENSTBEG00000000391
GCTTCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTAAGGAAATCTTCTACACAAGAGGA
GATCAAAAAAAGAAAGAAAGCTGTTCTCTTCTGTTTAAGCGATGATAAAAGAATAATTGTAGAGGAAACAAAGCAGATCT
TGGTGGGTGACATTGGTAATACTGTAGAGGACCCCTACACATCTTTTGTGAAGTTGCTACCTCTGAATGATTGCTATGCT
TTGTACGATGCCACATACAAAACAAAAGAGTCTAAGAAAGAAGACCTAGTATTTATATTCTGGGCTCCTGAAAGTGCACC
TTTAAAAAGCAAGATGAATTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTATTAAACACGAATGGCAAG
TAAATGGCTTGGATGATATTAAGAACTGTTCCATGCTTGGAGAAAAATTGGGAGGCAATGCAGTAGTTTCACTTGAAGGA
AAACCATTATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015508 possible_ortholog 1 retrogene
retro_amel_1347,
Canis familiaris ENSCAFG00000032562 possible_ortholog 1 retrogene
retro_cfam_1006,
Cavia porcellus ENSCPOG00000008996 possible_ortholog 1 retrogene
retro_cpor_1003,
Dasypus novemcinctus ENSDNOG00000017048 ortholog_one2one 7 retrogenes
retro_dnov_1072, retro_dnov_1379, retro_dnov_1697, retro_dnov_2195, retro_dnov_2691, retro_dnov_715, retro_dnov_905,
Erinaceus europaeus ENSEEUG00000013155 ortholog_one2one 4 retrogenes
retro_eeur_335, retro_eeur_448, retro_eeur_513, retro_eeur_578,
Echinops telfairi ENSETEG00000006010 possible_ortholog 3 retrogenes
retro_etel_1579, retro_etel_1622, retro_etel_684,
Felis catus ENSFCAG00000008480 possible_ortholog 2 retrogenes
retro_fcat_1223, retro_fcat_1395,
Latimeria chalumnae ENSLACG00000018011 ortholog_one2many 1 retrogene
retro_lcha_23,
Loxodonta africana ENSLAFG00000010579 possible_ortholog 1 retrogene
retro_lafr_1041,
Macropus eugenii ENSMEUG00000000739 ortholog_one2many 11 retrogenes
retro_meug_1026, retro_meug_1138, retro_meug_125, retro_meug_1266, retro_meug_1666, retro_meug_1791, retro_meug_2025, retro_meug_2062, retro_meug_210, retro_meug_321, retro_meug_668,
Microcebus murinus ENSMICG00000009237 possible_ortholog 1 retrogene
retro_mmur_493,
Monodelphis domestica ENSMODG00000012949 ortholog_many2many 1 retrogene
retro_mdom_171,
Mus musculus ENSMUSG00000062929 possible_ortholog 1 retrogene
retro_mmus_660,
Oryctolagus cuniculus ENSOCUG00000009383 ortholog_one2one 1 retrogene
retro_ocun_1397,
Otolemur garnettii ENSOGAG00000032321 possible_ortholog 1 retrogene
retro_ogar_2346,
Pteropus vampyrus ENSPVAG00000002798 possible_ortholog 1 retrogene
retro_pvam_398,
Rattus norvegicus ENSRNOG00000045892 possible_ortholog 1 retrogene
retro_rnor_684,
Sarcophilus harrisii ENSSHAG00000004732 ortholog_one2many 1 retrogene
retro_shar_528,
Sus scrofa ENSSSCG00000001959 possible_ortholog 2 retrogenes
retro_sscr_1198, retro_sscr_327,
Ictidomys tridecemlineatus ENSSTOG00000001675 possible_ortholog 3 retrogenes
retro_itri_1313, retro_itri_581, retro_itri_632,
Tupaia belangeri ENSTBEG00000016751 within_species_paralog 2 retrogenes
retro_tbel_153, retro_tbel_3085,
Tupaia belangeri ENSTBEG00000017634 within_species_paralog 8 retrogenes
retro_tbel_1206, retro_tbel_1977, retro_tbel_2425, retro_tbel_2880, retro_tbel_2881, retro_tbel_4020, retro_tbel_679, retro_tbel_851,
Vicugna pacos ENSVPAG00000003273 possible_ortholog 1 retrogene
retro_vpac_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_29 86.06 100.00
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2. retro_tbel_4131 89.82 100.00
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Download FASTA sequences of all ENSTBEG00000000391 retrocopies