Parental gene:

CFL2, ENSEEUG00000013155

Aliases:None
Description:cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_6361:7781..8496(-)


>ENSEEUG00000013155
GCTTCTGGAGTCACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTCAGGAAATCTTCGACGCAAGAGGA
GATCAAAAAAAGAAAGAAAGCTGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTAGAGGAAGCGAAGCAGA
TCTTGGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACAGCTTTTGTGAAGTTGCTACCTCTGAATGATTGCCGA
TATGCATTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAGGAAGACCTAGTATTTATATTCTGGGCGCCTGAAAG
TGCACCTTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTATTAAGCACGAGT
GGCAAGTAAATGGCTTGGATGACATAAAGGATCGCTCGACCCTGGGCGAGAAATTGGGAGGCAATGTTGTAGTTTCACTT
GAAGGAAAACCCTTATAA

Library Parental gene expression (RPM)
SRP017611_brain 26 .59 RPM
SRP017611_kidney 8 .25 RPM
SRP017611_liver 0 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000017048 ortholog_one2one 7 retrogenes
retro_dnov_1072, retro_dnov_1379, retro_dnov_1697, retro_dnov_2195, retro_dnov_2691, retro_dnov_715, retro_dnov_905,
Erinaceus europaeus ENSEEUG00000011893 within_species_paralog 1 retrogene
retro_eeur_529,
Echinops telfairi ENSETEG00000006010 possible_ortholog 3 retrogenes
retro_etel_1579, retro_etel_1622, retro_etel_684,
Latimeria chalumnae ENSLACG00000018011 ortholog_one2one 1 retrogene
retro_lcha_23,
Macropus eugenii ENSMEUG00000000739 ortholog_one2one 11 retrogenes
retro_meug_1026, retro_meug_1138, retro_meug_125, retro_meug_1266, retro_meug_1666, retro_meug_1791, retro_meug_2025, retro_meug_2062, retro_meug_210, retro_meug_321, retro_meug_668,
Monodelphis domestica ENSMODG00000012949 ortholog_one2many 1 retrogene
retro_mdom_171,
Oryctolagus cuniculus ENSOCUG00000009383 ortholog_one2one 1 retrogene
retro_ocun_1397,
Sarcophilus harrisii ENSSHAG00000004732 ortholog_one2one 1 retrogene
retro_shar_528,
Tupaia belangeri ENSTBEG00000000391 ortholog_one2one 2 retrogenes
retro_tbel_29, retro_tbel_4131,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_335 75.15 100.00
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2. retro_eeur_448 61.15 94.55
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3. retro_eeur_513 73.15 65.45
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4. retro_eeur_578 67.36 87.27
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Download FASTA sequences of all ENSEEUG00000013155 retrocopies