Parental gene:

STMN1, ENSSTOG00000021708

Aliases:None
Description:stathmin 1 [Source:HGNC Symbol;Acc:6510]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393284.1:10470000..10475585(-)


>ENSSTOG00000021708
ATGGCTTCTTCTGATATTCAGGTGAAAGAACTGGAGAAGCGTGCCTCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
GTCAAAAGAATCGGTCCCAGATTTCCCCCTTTCCCCTCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAAT
TAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAAGCTGAGGTCTTGAAGCAGCTTGCTGAGAAACGAGAGCATGAGAAA
GAAGTGATTCAGAAAGCAATAGAAGAAAACAACAACTTCAGTAAAATGGCGGAAGAGAAACTGACCCACAAAATGGAAGC
TAACAAAGAGAACCGAGAGGCACAAATGGCTGCCAAACTGGAGCGTTTGCGAGAGAAGGATAAGCACATTGAAGAAGTGC
GGAAGAACAAAGAATCCAAAGACCCTGCTGATGAAACTGAAGCTGACTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013761 possible_ortholog 1 retrogene
retro_btau_247,
Callithrix jacchus ENSCJAG00000009462 possible_ortholog 2 retrogenes
retro_cjac_3206, retro_cjac_474,
Cavia porcellus ENSCPOG00000011075 ortholog_one2one 1 retrogene
retro_cpor_1505,
Loxodonta africana ENSLAFG00000006089 possible_ortholog 1 retrogene
retro_lafr_84,
Mus musculus ENSMUSG00000028832 ortholog_one2one 3 retrogenes
retro_mmus_1660, retro_mmus_2470, retro_mmus_3383,
Oryctolagus cuniculus ENSOCUG00000006493 possible_ortholog 1 retrogene
retro_ocun_56,
Ictidomys tridecemlineatus ENSSTOG00000025094 within_species_paralog 2 retrogenes
retro_itri_1012, retro_itri_1423,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_554 82.05 77.18
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2. retro_itri_819 54.90 66.44
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3. retro_itri_826 90.07 100.00
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4. retro_itri_1806 80.79 100.00
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5. retro_itri_1833 89.78 91.95
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Download FASTA sequences of all ENSSTOG00000021708 retrocopies