Parental gene:

MYL6, ENSSSCG00000025467

Aliases:None
Description:Sus scrofa myosin, light chain 6, alkali, smooth muscle and non-muscle (MYL6), mRNA. [Source:RefSeq mRNA;Acc:NM_001163997]
Organism:Pig (Sus scrofa)
Coordinates:5:23123885..23127111(+)


>ENSSSCG00000025467
ATGTGTGACTTCACCGAGGACCAGACCGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGACCGAACAGGGGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGACGTGATGAGGGCCCTGGGCCAGAACCCCACCAACGCCGAGGTGCTCAAGGTCCTGGGGA
ACCCCAAGAGTGATGAGATGAACGTGAAGGTGCTGGACTTCGAGCACTTCCTGCCCATGCTGCAGACTGTGGCCAAGAAC
AAGGACCAGGGCACCTACGAGGACTATGTCGAAGGCCTGCGGGTGTTCGACAAGGAGGGCAACGGCACCGTCATGGGTGC
GGAGATCCGGCATGTTCTTGTCACACTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTGGTGGCAGGGCATGAGG
ACAGCAATGGTTGTATCAACTATGAAGAGCTTGTCCGCATGGTGCTGAATGGCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 137 .91 RPM
SRP014902_testis 41 .44 RPM
SRP018288_heart 12 .73 RPM
SRP018288_kidney 21 .57 RPM
SRP018288_liver 5 .60 RPM
SRP018288_lung 38 .18 RPM
SRP018856_adipose 130 .68 RPM
SRP035408_brain 13 .94 RPM
SRP035408_liver 5 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000092841 possible_ortholog 2 retrogenes
retro_hsap_1786, retro_hsap_2533,
Macropus eugenii ENSMEUG00000001272 ortholog_one2many 1 retrogene
retro_meug_2172,
Macaca mulatta ENSMMUG00000031838 possible_ortholog 6 retrogenes
retro_mmul_1633, retro_mmul_1663, retro_mmul_211, retro_mmul_2221, retro_mmul_2410, retro_mmul_96,
Mus musculus ENSMUSG00000090841 ortholog_one2many 7 retrogenes
retro_mmus_1281, retro_mmus_1504, retro_mmus_2328, retro_mmus_3231, retro_mmus_3333, retro_mmus_3358, retro_mmus_434,
Nomascus leucogenys ENSNLEG00000000205 possible_ortholog 2 retrogenes
retro_nleu_2736, retro_nleu_779,
Oryctolagus cuniculus ENSOCUG00000017371 possible_ortholog 1 retrogene
retro_ocun_1300,
Otolemur garnettii ENSOGAG00000034596 ortholog_many2many 1 retrogene
retro_ogar_2549,
Pongo abelii ENSPPYG00000004647 ortholog_one2many 3 retrogenes
retro_pabe_1467, retro_pabe_1864, retro_pabe_538,
Pan troglodytes ENSPTRG00000005080 possible_ortholog 2 retrogenes
retro_ptro_1196, retro_ptro_1476,
Sarcophilus harrisii ENSSHAG00000004472 ortholog_one2many 6 retrogenes
retro_shar_137, retro_shar_318, retro_shar_452, retro_shar_510, retro_shar_719, retro_shar_765,
Ictidomys tridecemlineatus ENSSTOG00000023318 ortholog_one2many 1 retrogene
retro_itri_1478,
Tupaia belangeri ENSTBEG00000000485 possible_ortholog 8 retrogenes
retro_tbel_130, retro_tbel_1715, retro_tbel_2980, retro_tbel_332, retro_tbel_3515, retro_tbel_3545, retro_tbel_3707, retro_tbel_4075,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_829 60.14 98.01
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Download FASTA sequences of all ENSSSCG00000025467 retrocopies