Parental gene:

ENSSSCG00000023323

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:2:8429987..8438180(+)


>ENSSSCG00000023323
ATGGGTGCTCCGGGCGGAAAAATCAACCGGCCGCGAACGGAGCTGAAGAAGAAGCTGTTCAAGCGACGGCGTGTGCTGAG
CAGGGAGCGGCGACTGAGGCACCGTGTGGTCGGAGCCGTGATAGACGAAGGGCTGATCACAAGGCACCACCTCAAGAAGC
GGGCGTCCAGTGCACGTGCCAACATTACTCTATCCGGGAAGAAGCGCAGAAAACTCCTCCAGCAGATCCGACTTGCCCAG
AAAGAAAAAGCAGCAATGGAAGTGGAAGCCCCCTACAAGCCAGCCAGGACTAGTAATTCACAGCCAAAATTGAAAAAGAA
GCCAAAGCCCCCCCAGGATGTAGACATGGAGGACCTCGAAAATCAGAGCTAA

Library Parental gene expression (RPM)
SRP014902_placenta 13 .94 RPM
SRP014902_testis 15 .98 RPM
SRP018288_heart 10 .35 RPM
SRP018288_kidney 26 .10 RPM
SRP018288_liver 18 .23 RPM
SRP018288_lung 24 .23 RPM
SRP018856_adipose 22 .21 RPM
SRP035408_brain 39 .38 RPM
SRP035408_liver 27 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006512 ortholog_one2one 1 retrogene
retro_amel_1386,
Bos taurus ENSBTAG00000010465 ortholog_one2one 2 retrogenes
retro_btau_1195, retro_btau_1799,
Canis familiaris ENSCAFG00000015719 ortholog_one2one 2 retrogenes
retro_cfam_1104, retro_cfam_757,
Felis catus ENSFCAG00000025454 ortholog_one2one 2 retrogenes
retro_fcat_1722, retro_fcat_773,
Macaca mulatta ENSMMUG00000013949 ortholog_one2one 4 retrogenes
retro_mmul_1186, retro_mmul_1541, retro_mmul_1785, retro_mmul_1981,
Mus musculus ENSMUSG00000071653 ortholog_one2one 2 retrogenes
retro_mmus_1809, retro_mmus_759,
Otolemur garnettii ENSOGAG00000033103 ortholog_one2one 1 retrogene
retro_ogar_811,
Rattus norvegicus ENSRNOG00000019701 ortholog_one2one 4 retrogenes
retro_rnor_1066, retro_rnor_1955, retro_rnor_851, retro_rnor_883,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1162 69.64 88.62
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2. retro_sscr_1163 69.64 88.62
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Download FASTA sequences of all ENSSSCG00000023323 retrocopies