Parental gene:

ENSSHAG00000015356

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834603.1:1765695..1816593(-)


>ENSSHAG00000015356
CAGGAAGTGGCAGTGAAGCTAGAATCTCAGAAGGCCAGGCATCCCCAGTTGCTGTACGAGAGCAAACTCTATAAGATTCT
TCAAGGTGGGGTTGGCATTCCCCACATACGGTGGTATGGTCAAGAAAAAGACTATAATGTTCTAGTCATGGATCTTCTTG
GACCGAGTCTTGAAGACCTCTTCAATTTCTGTTCCCGCAGGTTCACAATGAAAACAGTACTTATGCTAGCTGACCAGATG
ATCAGTAGAATTGAATTTGTGCATACAAAGAATTTTATACACAGAGACATTAAACCAGATAATTTCCTAATGGGTATTGG
GCGTCACTGTAATAAGTTATTCCTTATTGACTTTGGTTTGGCCAAAAAGTACAGAGACAACAGAACAAGACAACATATAC
CATACAGAGAAGATAAAAATCTCACTGGCACTGCCCGGTATGCCAGCATCAATGCACACCTTGGCATCGAGCAGAGTCGT
CGTGATGATATGGAGTCTCTAGGATATGTGTTGATGTATTTTAATAGGACCAGCCTGCCCTGGCAAGGATTAAAGGCTGC
AACAAAAAAACAAAAGTATGAAAAGATTAGTGAAAAGAAGATGTCCACTCCTGTTGAAGTTTTATGTAAGGGGTTTCCAG
CAGAATTTGCCATGTATCTAAACTATTGTCGTGGACTACGTTTTGAAGAAGCACCAGATTATATGTATCTGAGGCAACTA
TTTCGTATTCTTTTCAGGACTCTGAACCACCAGTATGACTACACATTTGATTGGACAATGTTAAAGCAGAAAGCAGCCCA
ACAGGCAGCCTCTTCCAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGCAAGCAAACTGACAAAACCAAGAGTAACA
TGAAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005326 possible_ortholog 2 retrogenes
retro_btau_1662, retro_btau_49,
Canis familiaris ENSCAFG00000018286 possible_ortholog 1 retrogene
retro_cfam_1887,
Callithrix jacchus ENSCJAG00000021121 possible_ortholog 1 retrogene
retro_cjac_2680,
Homo sapiens ENSG00000113712 possible_ortholog 1 retrogene
retro_hsap_32,
Gorilla gorilla ENSGGOG00000013926 possible_ortholog 3 retrogenes
retro_ggor_1178, retro_ggor_742, retro_ggor_984,
Myotis lucifugus ENSMLUG00000002910 possible_ortholog 4 retrogenes
retro_mluc_1531, retro_mluc_2134, retro_mluc_2215, retro_mluc_597,
Macaca mulatta ENSMMUG00000001758 possible_ortholog 2 retrogenes
retro_mmul_2207, retro_mmul_295,
Monodelphis domestica ENSMODG00000009937 possible_ortholog 1 retrogene
retro_mdom_2005,
Oryctolagus cuniculus ENSOCUG00000006669 possible_ortholog 7 retrogenes
retro_ocun_1068, retro_ocun_1098, retro_ocun_1506, retro_ocun_500, retro_ocun_502, retro_ocun_506, retro_ocun_644,
Otolemur garnettii ENSOGAG00000003253 possible_ortholog 2 retrogenes
retro_ogar_1195, retro_ogar_825,
Sorex araneus ENSSARG00000011446 ortholog_one2one 1 retrogene
retro_sara_518,
Sarcophilus harrisii ENSSHAG00000007638 within_species_paralog 2 retrogenes
retro_shar_260, retro_shar_710,
Sus scrofa ENSSSCG00000014435 possible_ortholog 1 retrogene
retro_sscr_560,
Ictidomys tridecemlineatus ENSSTOG00000022141 possible_ortholog 1 retrogene
retro_itri_1378,
Drosophila melanogaster FBgn0015024 ortholog_one2many 4 retrogenes
retro_dmel_10, retro_dmel_32, retro_dmel_40, retro_dmel_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_834 92.54 77.29
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Download FASTA sequences of all ENSSHAG00000015356 retrocopies