Parental gene:

MSL3, ENSSARG00000008477

Aliases:None
Description:male-specific lethal 3 homolog (Drosophila) [Source:HGNC Symbol;Acc:7370]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_41:43204..60753(+)


>ENSSARG00000008477
TGGGACCGATGGCCAGCTGATCATGTACTCGACGACGAAACCCGGAGATTACAGCGTAAATTGGCAAGAAAAGCTGTCGC
TCGCAGAAGCTCAGGACGGAAGAAGCGGCGCTGCAGGCTGCCTGGTGTGGATTCTGTCTTAAAAAGCCTTCCCGTTGAAG
AAACACATGAAAACGACGAAAACTCAATAAGCACTTCCTCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGACCT
TTGTAAGGAGATGGTGGATGGATTACGAATAACCTTCGATTATACGCTTCCGTTGGTTTTGCTCTATCCGTATGAACAAG
TTCAGTATAAAAAGGTGACCTCGTCCAAATTTTTTCTTCCGATTAAGGAAAGTGCCACAAACTCTAATAGGAACCAGGAG
GAGCTCTCTCCCAGCCCCCCTCTCTTGAACCCATCCACGCCGCAGTCCACGGAGAGCCAGCCTGCCTCGGGGGAGCCTGC
CACCCCCAAACGGCGCAAAGCCGAGCCCGAAGCTCTGCAGTCTCTGAGGCGCTCCACGCGCCACTCGGCCAGCTGCGACA
GACTGTCGGAGAGCAGCGCCTCGCCGCAGCCCAAGCGCCGGCAGCAGGACACGTCCGCCAACATGCCCAAACTCTTCCTG
CACCTGGAAAAGAAGACCCCCGTGCATAGCAGATCCTCCTCGCCTGTCCCTCTGACTCCGAGCAAGGAAGGGAACACTGT
GTTGGCCGGCTTCGAAGGCAGAAGAACTAATGAAATAAATGAGGTACTTTCCTGGAAACTTGTGCCTGAAAGTTACCCCC
CGAGTGACCAGCCACCTCCAGCCTCGTTTATTTATGGGGCCCAACACTTGCTGCGCTTGTTCGTGAAACTTCCGGAAATC
CTTGGGAAGATGTCCTTCGCCGAGAAGAATCTGAAGGCTTTATTGAAGCACTTTGATCTCTTTCTGAGGTTTCTGGCTGA
GTACCATGATGACTTCTTCCCAGAGTCTGCCTACGTGGCCGCCTGCGAGGCGCACTACAGCACCAAGAACCCCAGGGCGA
TCTACTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009278 ortholog_one2one 1 retrogene
retro_btau_883,
Callithrix jacchus ENSCJAG00000001061 ortholog_one2many 1 retrogene
retro_cjac_1490,
Cavia porcellus ENSCPOG00000004692 ortholog_one2many 5 retrogenes
retro_cpor_1423, retro_cpor_1424, retro_cpor_1425, retro_cpor_1426, retro_cpor_95,
Homo sapiens ENSG00000005302 ortholog_one2one 2 retrogenes
retro_hsap_2401, retro_hsap_4097,
Gorilla gorilla ENSGGOG00000006582 ortholog_one2one 2 retrogenes
retro_ggor_1820, retro_ggor_2749,
Macaca mulatta ENSMMUG00000002689 ortholog_one2one 2 retrogenes
retro_mmul_2362, retro_mmul_972,
Monodelphis domestica ENSMODG00000017350 ortholog_one2one 1 retrogene
retro_mdom_1422,
Pongo abelii ENSPPYG00000020123 ortholog_one2one 2 retrogenes
retro_pabe_2166, retro_pabe_3353,
Pan troglodytes ENSPTRG00000021662 ortholog_one2one 2 retrogenes
retro_ptro_1751, retro_ptro_2778,
Pteropus vampyrus ENSPVAG00000005000 ortholog_one2one 1 retrogene
retro_pvam_203,
Tarsius syrichta ENSTSYG00000012788 ortholog_one2one 4 retrogenes
retro_tsyr_1079, retro_tsyr_1649, retro_tsyr_1706, retro_tsyr_948,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_139 75.19 59.34
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Download FASTA sequences of all ENSSARG00000008477 retrocopies