Parental gene:

HDAC2, ENSSARG00000000354

Aliases:None
Description:histone deacetylase 2 [Source:HGNC Symbol;Acc:4853]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_6753:1144..14808(-)


>ENSSARG00000000354
AGGCCCCATAAAGCCACTGCTGAAGAAATGACAAAATACCACAGTGATGAATACATCAAATTTCTACGTTCAATAAGACC
AGATAACATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGGGAGGATTGTCCAGTGTTTGATGGACTCTTTG
AGTTTTGTCAGCTCTCTACTGGTGGCTCAGTTGCTGGGGCTGTGAAGTTAAACCGACAACAAACTGATATGGCTGTTAAC
TGGGCTGGAGGATTACATCATGCTAAGAAATCAGAAGCATCAGGATTCTGTTACGTTAATGATATTGTGCTTGCCATCCT
TGAATTACTAAAGTATCATCAGAGAGTCTTATATATTGATATTGATATTCATCATGGTGATGGTGTTGAAGAAGCATTTT
ATACAACAGATCGTGTGATGACTGTATCTTTCCATAAGTATGGGGAATACTTTCCTGGTACTGGAGACTTGAGGGATATT
GGTGCAGGAAAAGGCAAATACTATGCTGTCAACTTTCCAATGAGAGATGGTATAGATGATGAGTCATATGGACAGATATT
TAAACCTATCATCTCAAAGGTTATGGAGATGTATCAACCTAGTGCTGTGGTGTTACAGTGTGGTGCTGATTCACTATCTG
GTGATAGACTTGGTTGCTTCAATCTGACTGTCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAATTGCCATATAATGATTATTTTGAGTATTTTGGACCGGACTTCAAACTTCATATTAGTCCCT
CAAATATGACAAACCAGAACACTCCAGAATATATGGAAAAGATAAAACAGCGTTTATTTGAAAATTTACGCATGTTACCT
CATGCCCCTGGCGTTCAAATGCAAGCTATCCCAGAAGATGCTGTTCATGAGGATAGTGGAGATGAAGATGGAGAAGATCC
AGATAAGAGAATTTCTGCATCAGACAAACGAATAGCCTGTGATGAATTCTCAGATTCTGAGGATGAAGGGGAAGGAGGTT
GTAGAAACGTGGCAGATCACAAAAAAGGAGCAAAGAAAGCCAGAATTGAAGAAGATAAGAAAGAAATGGAAGACAAAAAA
GCAGATGTTAAGGAAGAAGATAAATCCAAGGATAATAGTGGTGAAAAAACAGATACCAAAGGAGCCAAATCAGAACAGCT
TAACAACCCTTGA

Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000002649 ortholog_one2many 1 retrogene
retro_cint_18,
Echinops telfairi ENSETEG00000008468 ortholog_one2many 1 retrogene
retro_etel_488,
Myotis lucifugus ENSMLUG00000003117 ortholog_one2many 4 retrogenes
retro_mluc_1570, retro_mluc_225, retro_mluc_2548, retro_mluc_935,
Monodelphis domestica ENSMODG00000017860 ortholog_one2one 1 retrogene
retro_mdom_597,
Ornithorhynchus anatinus ENSOANG00000003631 ortholog_one2one 1 retrogene
retro_oana_79,
Pan troglodytes ENSPTRG00000018519 ortholog_one2one 1 retrogene
retro_ptro_69,
Ictidomys tridecemlineatus ENSSTOG00000012779 ortholog_one2one 1 retrogene
retro_itri_374,
Tarsius syrichta ENSTSYG00000009363 ortholog_one2one 4 retrogenes
retro_tsyr_1337, retro_tsyr_1355, retro_tsyr_681, retro_tsyr_765,
Tursiops truncatus ENSTTRG00000015043 ortholog_one2one 1 retrogene
retro_ttru_462,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_651 98.23 52.33
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Download FASTA sequences of all ENSSARG00000000354 retrocopies