Parental gene: | Srsf7, ENSRNOG00000027360 |
| Aliases: | Srsf7, Sfrs7 |
| Description: | splicing factor, arginine/serine-rich 7 [Source:RefSeq peptide;Acc:NP_001034124] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 6:2857411..2863365(-) |
>ENSRNOG00000027360
ATGTCACGTTACGGGCGGTATGGAGGAGAAACCAAGGTATATGTTGGTAACCTGGGAACTGGCGCTGGTAAAGGAGAGTT
AGAAAGGGCATTCAGTTACTATGGGCCCTTAAGAACTGTATGGATTGCCAGAAATCCTCCAGGATTTGCCTTTGTGGAAT
TTGAAGACCCTAGAGATGCAGAGGATGCAGTTCGAGGATTGGATGGGAAAGTGATTTGTGGTTCTCGAGTGAGGGTTGAA
TTATCAACAGGCATGCCTCGGAGATCTCGGTTTGATAGGCCACCTGCCCGTCGTCCCTTTGATCCTAATGATAGATGCTA
TGAGTGTGGTGAAAAGGGACATTATGCTTATGACTGTCATCGCTATAGCCGACGAAGAAGAAGCAGGTCACGATCTAGAT
CACATTCCCGATCCAGGGGAAGGCGATACTCTCGCTCACGTAGTAGGAGCCGCGGTAGGAGGTCAAGATCAGCATCTCCT
CGACGATCAAGGTCCGTGTCTCTTCGTAGATCAAGATCAGCTTCACTCAGAAGATCTAGGTCTGGTTCTATAATAGGATC
GAGGTATTTCCAATCCCGCTCAAGGTCGAGATCAAGATCCAGGTCTATTTCACGACCAAGAAGCAGCCGATCAAAATCCA
GATCTCCATCTCCTAAAAGAAGTCGTTCCCCATCAGGAAGTCCACACAGAAGTGCAAGTCCAGAAAGAATGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 38 .03 RPM |
| SRP017611_kidney | 33 .57 RPM |
| SRP017611_liver | 25 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015988 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000029620 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007821 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000016459 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009536 | ortholog_many2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000008669 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024097 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010169 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000520 | within_species_paralog | 11 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005513 | other_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006380 | other_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015970 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_478 | 83.40 | 97.90 | Please wait, loading  |
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| 2. | retro_rnor_1535 | 77.50 | 100.00 | Please wait, loading |
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| 3. | retro_rnor_1977 | 67.14 | 58.40 | Please wait, loading |
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| 4. | retro_rnor_1984 | 92.81 | 70.17 | Please wait, loading |
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| 5. | retro_rnor_2419 | 83.33 | 100.00 | Please wait, loading |
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| 6. | retro_rnor_2420 | 87.45 | 100.00 | Please wait, loading |
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| 7. | retro_rnor_2421 | 83.33 | 100.00 | Please wait, loading |
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| 8. | retro_rnor_2495 | 67.14 | 58.40 | Please wait, loading |
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| 9. | retro_rnor_2501 | 84.09 | 73.53 | Please wait, loading |
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| 10. | retro_rnor_2502 | 82.52 | 85.71 | Please wait, loading |
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| 11. | retro_rnor_2503 | 83.33 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000027360 retrocopies