Parental gene:

Ccdc90b, ENSRNOG00000009462

Aliases:Ccdc90b, RGD1308637
Description:Coiled-coil domain-containing protein 90B, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q4V897]
Organism:Rat (Rattus norvegicus)
Coordinates:1:163647742..163661295(+)


>ENSRNOG00000009462
ATGAGGAACCGCTGGATTTGGCGGTTCCTGCGTCCCGAGTGCAGTGGAATCCGCTGGATTTCAAGTCCCCACGGGCGTCT
GTCACCCGCCCTGCGGAGAGGTTTCTTGACCACTACAACTAAGTCGGATTATGATAGAAGGCCAGTGGAAATAACTCCTT
TAGAACAAAGAAAATTAACTTTTGATACCCATGCATTGGTGCAGGACTTGGAAACTCATGGATTTGACAAAGGGCAAGCA
CAGACGATTGTGTCGGTCCTAAGTACGTTATCAAATGTCAGCCTGGATACTGTCTACAAGGAGATGGTGACGAAAGCCCA
ACAGGAAATAACCATCCAGCAGCTAATGGCTCATTTGGATTCCATCAGAAAAGACATGGTCATCCTAGAGAAAAGTGAAT
TTGCAAATCTGAGAGCAGAGAATGAGAAAATGAAAATTGAACTAGATCAAGTTAAGCAGCAGCTGATTAATGAAACCAGT
CGAATCAGAGCAGACAATAGGCTGGACATCAACCTGGAGCGGAGCAGAGTGACAGATATGTTCACAGATCAAGAAAAACA
ACTTATGGAAGCAACCAATGAATTTACCAAAAAGGATATGCAAACTAAAAGTATTATTTCAGAGACCAGTAATAAAATTG
ACACTGAAATCGCTTCCTTAAAAACACTGATGGAGTCGAGCAAACTTGAGACAATTCGTTATCTTGCAGCCTCGGTGTTC
ACTTGCTTGGCGATAGCACTGGGGTTTTATAGGTTCTGGAAGGAGAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 7 .84 RPM
SRP017611_kidney 11 .51 RPM
SRP017611_liver 4 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010541 ortholog_one2one 2 retrogenes
retro_chof_1396, retro_chof_780,
Callithrix jacchus ENSCJAG00000014547 ortholog_one2many 1 retrogene
retro_cjac_219,
Homo sapiens ENSG00000137500 ortholog_one2one 1 retrogene
retro_hsap_3050,
Macaca mulatta ENSMMUG00000020154 ortholog_one2one 2 retrogenes
retro_mmul_1880, retro_mmul_773,
Nomascus leucogenys ENSNLEG00000016478 ortholog_one2one 1 retrogene
retro_nleu_1644,
Ochotona princeps ENSOPRG00000004144 ortholog_one2one 2 retrogenes
retro_opri_197, retro_opri_682,
Pongo abelii ENSPPYG00000003736 ortholog_one2one 1 retrogene
retro_pabe_2525,
Pan troglodytes ENSPTRG00000004129 ortholog_one2one 1 retrogene
retro_ptro_1990,
Pteropus vampyrus ENSPVAG00000005459 ortholog_one2one 1 retrogene
retro_pvam_614,
Tupaia belangeri ENSTBEG00000014665 ortholog_one2one 2 retrogenes
retro_tbel_3436, retro_tbel_4221,
Tarsius syrichta ENSTSYG00000011196 ortholog_one2one 1 retrogene
retro_tsyr_710,
Tursiops truncatus ENSTTRG00000003998 ortholog_one2one 1 retrogene
retro_ttru_445,
Vicugna pacos ENSVPAG00000007753 ortholog_one2one 1 retrogene
retro_vpac_366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_868 84.86 72.27
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Download FASTA sequences of all ENSRNOG00000009462 retrocopies