Parental gene:

Atp6v1g1, ENSRNOG00000008163

Aliases:None
Description:V-type proton ATPase subunit G 1 [Source:RefSeq peptide;Acc:NP_001100130]
Organism:Rat (Rattus norvegicus)
Coordinates:5:83481866..83488047(+)


>ENSRNOG00000008163
ATGGCGAGTCAGTCGCAGGGCATCCAGCAGCTACTGCAGGCTGAGAAGCGGGCGGCCGAGAAGGTGTCCGAGGCCCGCAA
GCGAAAGAACCGGAGACTGAAGCAGGCCAAAGAAGAAGCCCAGGCTGAAATTGAACAGTACCGTCTGCAGAGGGAGAAGG
AGTTCAAGGCCAAGGAAGCTGCGGCATTGGGGTCCCATGGCAGTTGTAGCAGTGAGGTGGAAAAGGAGACCCAGGAGAAG
ATGACCATCCTCCAGAACTACTTTGAGCAGAACAGAGATGAAGTCCTGGATAACCTCTTGGCCTTTGTGTGTGACATCCG
GCCAGAAATCCATGAAAACTACCGCATAAATGGATAG

Library Parental gene expression (RPM)
SRP017611_brain 82 .11 RPM
SRP017611_kidney 106 .00 RPM
SRP017611_liver 51 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020461 possible_ortholog 3 retrogenes
retro_cjac_1788, retro_cjac_2513, retro_cjac_76,
Dasypus novemcinctus ENSDNOG00000008083 ortholog_one2one 15 retrogenes
retro_dnov_1173, retro_dnov_1447, retro_dnov_1475, retro_dnov_1504, retro_dnov_1588, retro_dnov_1645, retro_dnov_193, retro_dnov_1998, retro_dnov_2179, retro_dnov_218, retro_dnov_2416, retro_dnov_245, retro_dnov_336, retro_dnov_479, retro_dnov_790,
Dipodomys ordii ENSDORG00000014850 ortholog_one2one 5 retrogenes
retro_dord_434, retro_dord_466, retro_dord_614, retro_dord_640, retro_dord_749,
Equus caballus ENSECAG00000011155 ortholog_one2one 1 retrogene
retro_ecab_816,
Echinops telfairi ENSETEG00000008080 ortholog_one2one 3 retrogenes
retro_etel_350, retro_etel_594, retro_etel_996,
Loxodonta africana ENSLAFG00000013437 ortholog_one2one 2 retrogenes
retro_lafr_1002, retro_lafr_39,
Microcebus murinus ENSMICG00000015368 ortholog_one2one 3 retrogenes
retro_mmur_1217, retro_mmur_1259, retro_mmur_755,
Myotis lucifugus ENSMLUG00000008657 ortholog_one2many 2 retrogenes
retro_mluc_373, retro_mluc_839,
Macaca mulatta ENSMMUG00000004899 possible_ortholog 4 retrogenes
retro_mmul_1783, retro_mmul_2018, retro_mmul_2046, retro_mmul_331,
Monodelphis domestica ENSMODG00000019574 ortholog_one2one 1 retrogene
retro_mdom_1675,
Mus musculus ENSMUSG00000039105 ortholog_one2many 5 retrogenes
retro_mmus_2028, retro_mmus_2784, retro_mmus_2787, retro_mmus_3316, retro_mmus_819,
Otolemur garnettii ENSOGAG00000010103 ortholog_one2one 3 retrogenes
retro_ogar_1824, retro_ogar_2822, retro_ogar_342,
Pteropus vampyrus ENSPVAG00000008334 ortholog_one2one 1 retrogene
retro_pvam_1432,
Tursiops truncatus ENSTTRG00000015203 ortholog_one2one 2 retrogenes
retro_ttru_125, retro_ttru_480,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_676 88.89 83.90
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2. retro_rnor_1246 82.83 83.90
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Download FASTA sequences of all ENSRNOG00000008163 retrocopies