Parental gene:

Tm2d1, ENSRNOG00000007527

Aliases:Tm2d1, Bbp
Description:TM2 domain-containing protein 1 precursor [Source:RefSeq peptide;Acc:NP_001102140]
Organism:Rat (Rattus norvegicus)
Coordinates:5:120939558..120981789(-)


>ENSRNOG00000007527
ATGGCGGCCGCCTGGCCCGCGGGTCGGGCTTCTCCAGCGGCGGGGCCTCCGGCCCTCCTCCGCACTCTGTGGCTCGTGAC
GGTCGCCGCGGGACATTGTGGGGCTGCTGCCTCTGGCGCTGTCGGAGGCGAGGAGACGCCCAAGTGTGAGGACCTCAGAG
TGGGACAATATATTTGTAAAGAACCAAAAATAAATGATGCTACGCAAGAACCAGTTAATTGTACAAACTACACAGCTCAT
GTTCAATGTTTTCCAGCACCCAACATAACTTGTAAGGATTTGAGTGGTAATGAAACACATTTTACTGGAAGTGAAGTTGG
TTTTCTCAAGCCCATATCTTGCCGAAATGTGAATGGCTATTCATACAAAGTGGCAGTTGCACTATCTCTTTTTTTGGGAT
GGCTGGGAGCAGATCGATTTTACCTCGGATATCCTGCCTTAGGCTTGTTAAAGTTTTGCACTGTGGGATTTTGCGGAATT
GGGAGCCTAATTGATTTCGTCCTTATTTCAATGCAGATCGTCGGCCCTTCGGATGGGAGTAGTTACATTATAGACTATTA
TGGAACCAGACTCACGAGACTCAGCGTTACTAATGAGACATTTAGAAAAACACAGTTGTATCCATGA

Library Parental gene expression (RPM)
SRP017611_brain 20 .20 RPM
SRP017611_kidney 27 .56 RPM
SRP017611_liver 8 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011705 ortholog_one2one 1 retrogene
retro_amel_1290,
Canis familiaris ENSCAFG00000018838 ortholog_one2one 1 retrogene
retro_cfam_1213,
Choloepus hoffmanni ENSCHOG00000013535 ortholog_one2one 1 retrogene
retro_chof_1494,
Cavia porcellus ENSCPOG00000012287 ortholog_one2one 1 retrogene
retro_cpor_471,
Equus caballus ENSECAG00000015035 ortholog_one2one 1 retrogene
retro_ecab_556,
Erinaceus europaeus ENSEEUG00000001567 ortholog_one2one 1 retrogene
retro_eeur_708,
Loxodonta africana ENSLAFG00000013979 ortholog_one2one 1 retrogene
retro_lafr_662,
Mus musculus ENSMUSG00000028563 ortholog_one2one 2 retrogenes
retro_mmus_1412, retro_mmus_1981,
Tupaia belangeri ENSTBEG00000002089 ortholog_one2one 3 retrogenes
retro_tbel_1156, retro_tbel_1730, retro_tbel_201,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1104 70.69 55.29
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Download FASTA sequences of all ENSRNOG00000007527 retrocopies