Parental gene:

Tm2d1, ENSMUSG00000028563

Aliases:Tm2d1, 2310026L18Rik, AA990549, Bbp
Description:TM2 domain containing 1 [Source:MGI Symbol;Acc:MGI:2137022]
Organism:Mouse (Mus musculus)
Coordinates:4:98355369..98383306(-)


>ENSMUSG00000028563
ATGGCGGCCGCCTGGCCCGCGGGTCGGGCTTCCCCAGCGGCGGGGCCTCCGGGCCTTCTCCGCACCCTGTGGCTCGTGAC
GGTCGCCGCGGGACACTGTGGGGCTGCTGCCTCTGGCGCTGTCGGGGGCGAGGAGACACCCAAGTGTGAGGACCTCAGGG
TGGGACAATATATTTGTAAAGAACCAAAAATAAATGATGCTACGCAAGAACCAGTTAATTGTACAAACTACACAGCTCAT
GTTCAATGTTTTCCAGCACCCAAAATAACTTGTAAGGATTTGAGTGGTAATGAAACACATTTTACTGGAAGTGAAGTCGG
TTTTCTCAAGCCCATATCTTGCCGAAATGTGAATGGCTATTCGTACAAAGTGGCAGTTGCATTATCTCTCTTTTTGGGAT
GGCTGGGAGCAGATCGATTTTACCTCGGATATCCTGCCTTAGGCTTGTTAAAATTTTGCACCGTAGGATTTTGCGGAATT
GGGAGCCTAATTGATTTCATTCTTATTTCAATGCAGATTGTTGGACCTTCAGATGGAAGTAGTTACATTATAGACTATTA
TGGAACCAGGCTTACAAGACTCAGCATTACTAATGAAACATTTAGAAAAACCCAGCTGTACCCATAA

Library Parental gene expression (RPM)
SRP007412_brain 9 .63 RPM
SRP007412_cerebellum 10 .20 RPM
SRP007412_heart 14 .10 RPM
SRP007412_kidney 19 .54 RPM
SRP007412_liver 8 .71 RPM
SRP007412_testis 4 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011705 ortholog_one2one 1 retrogene
retro_amel_1290,
Canis familiaris ENSCAFG00000018838 ortholog_one2one 1 retrogene
retro_cfam_1213,
Choloepus hoffmanni ENSCHOG00000013535 ortholog_one2one 1 retrogene
retro_chof_1494,
Cavia porcellus ENSCPOG00000012287 ortholog_one2one 1 retrogene
retro_cpor_471,
Equus caballus ENSECAG00000015035 ortholog_one2one 1 retrogene
retro_ecab_556,
Erinaceus europaeus ENSEEUG00000001567 ortholog_one2one 1 retrogene
retro_eeur_708,
Loxodonta africana ENSLAFG00000013979 ortholog_one2one 1 retrogene
retro_lafr_662,
Rattus norvegicus ENSRNOG00000007527 ortholog_one2one 1 retrogene
retro_rnor_1104,
Tupaia belangeri ENSTBEG00000002089 ortholog_one2one 3 retrogenes
retro_tbel_1156, retro_tbel_1730, retro_tbel_201,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1412 94.77 73.08
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2. retro_mmus_1981 68.57 65.38
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Download FASTA sequences of all ENSMUSG00000028563 retrocopies