Parental gene:

PRAMEF10, ENSPTRG00000029629

Aliases:None
Description:PRAME family member 10 [Source:HGNC Symbol;Acc:27997]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:GL389032.1:10083..13013(-)


>ENSPTRG00000029629
ATGAGCCTCCAGTCCCCATCCAGACTCCTGGAGCTGGCAGGGCAGAGCCTGCTGAGGAACCAGTTCTTGACCATCTTCAC
CCTGGATGAGCTGCCCAGGGAGGTCTTCCCTCTGATGTTCATGGAGGCCTTCAGCATGAGACGTTTTGAGGCCCTGAAGT
TGATGGTGCAGGCCTGGCCCTTCCTCTGCCTCCCTCTGGGATCCCTGATGAAGACACCTCATCTGGAGACCTTGCAAGCT
GTCCTGAGGGGACTTGATACACTGGTGGCCCAGAAGGTTCGCCCCAGGAGGTGGAAACTTCAAGTGCTGGATTTGCGGGA
TGTTGATGAGAATTTCTGGACCATATGGTCTGGAGCCAAGGTCCTCTCCTGCTCCCCAGAGGTCATGAGTAAGAGGCAGA
CAGTGGAGGACTGTCCAAGGATGGGAGAGCGCCAGCCCTTGAAGGTGTTCATAGACCTCTGCCTAAAGGAAAGTACACTG
GATGAATGCCTGAGCTACCTTTGTGGGTGGATCCACTACAGAAGAGGCCTAGTGCACCTGTGTTGTAATAAGGTGCAGAA
TTACTCAATGCCCACTTCAAGTTTCTGCAATTTATTGGAAAGGATATACCCAGACAGTATCCAGGAGTTGGAAGTCTGGA
AAAAGTCCTCTCTGAATAAAACAGGAAAGTTTGCCCCTTACCTGAGCCAGATGAGCAATCTTCGTGAACTCTTTTTAGCC
TTCAGTTATGAGCGTGAGTTATACGTGAGCGTCCAGTGGCCGTGCATTCCTGACTTGGACTCTCCATTCCTCTGCCTGTA
CTACCCCCAGATGCTTTATATAAAAAAGATCAGTAATATCAAAGAGCACCTGGAGCACCTGCTCAGGTACCTCAAGAACC
CCTTGGGTGCTTTTATATTCAGTGATGCTTACCTAACTGATCGGGACATGGAGTGTCTGTCTCAGTACCCAAGCCTCAGT
CAGCTAAAGGAGCTGCGTCTGATTCATATCCTAATGTGGACCACCAATCTTGAGCCCCTTGGCGTTCTGCTGGAGAAAGT
TGCTGTTACTCTCAAGACCCTCGTCTTAAAGGACTGTCGGATCCAGGACCCCCAACTCAGGGTCCTCCTGCCTGCCCTGA
GCCACTGTTCCCAGCTCACCACCTTCAACTTTCATGGAAATGAGACCTCCATGAATGCTCTGAAAGACCTGCTGCGTCAC
ACAGGTGGGCTGAGCAAGTTAGGCCTGGAGTTGTATCCTGCCCCTCTGGAGAGTCTTGACTACAAGGGTCATGTCAACTG
GGAGATCCTCACCCCAATTCGGGCTGAGCTGATGCGTACACTCAGGGAAGTCAGGCAGCCCAAGAGGATCTTCTTCGGTC
CCGTCCCTTGCCCTACGTGTGGCTCATGGCCATCTGAGAAAGTGGACTTCCATCTTTGCTCCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013324 ortholog_many2many 1 retrogene
retro_dord_231,
Homo sapiens ENSG00000187545 ortholog_one2one 1 retrogene
retro_hsap_220,
Mus musculus ENSMUSG00000025839 ortholog_many2many 1 retrogene
retro_mmus_557,
Otolemur garnettii ENSOGAG00000000273 ortholog_many2many 2 retrogenes
retro_ogar_1100, retro_ogar_1238,
Ochotona princeps ENSOPRG00000009716 ortholog_many2many 1 retrogene
retro_opri_661,
Rattus norvegicus ENSRNOG00000042820 ortholog_many2many 1 retrogene
retro_rnor_1371,
Rattus norvegicus ENSRNOG00000048835 ortholog_many2many 1 retrogene
retro_rnor_396,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_330 76.94 99.79
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Download FASTA sequences of all ENSPTRG00000029629 retrocopies