Parental gene:

Pramef17, ENSRNOG00000042820

Aliases:None
Description:Protein Pramef17 [Source:UniProtKB/TrEMBL;Acc:F1LYT8]
Organism:Rat (Rattus norvegicus)
Coordinates:5:166131000..166133742(-)


>ENSRNOG00000042820
CTGAAAGCCCCACCCACACTCCTGCAGCTGGCTGCACAGAGCACGGTAAAGAAGGAGGTGCTGACCATCTCTGTTCTGGA
GTACCTACCAAGGGAGCTCTTCCCAACGCTGTTCAAGGAGGCCGACACTCAGAGAAAAGCAAAGATGATTAAGATCCTGG
TGGAATACTGGCCCTACCCTTGCCTTCTTGTTAGGTTGCTGATAGATAAACCCAACTTGGAGATCTTCCAGGCTATACTG
GATGGAGTTGGCACATGGCTGAAACGGAAATATCGCCCCAGGATGGGGAAGCTTGAAGTGGTTGATTTGAGGAATGGACA
CCTTGACTCCTGGGATTTGCAGGCTGGAAGAGAGGGTGGAGGAGCCCAATCAGAAACTGTGCCTGAGAAGCAAGTAATGG
AGGGCCACTCAAACAGGCGGCGTTTGAGGGTGTTCTGTGACCTTTCCTTTAAGTCTTCTAAGCATGAAGATAAACACCAA
ACACATCTGTTGCGGTGGGCAAAGGACAGAGAGGATTTCCTGCATCTGTGCTGTAAGAAGTTAGAGATTGGAGCATTAGA
AGTGTCCAAGGTCAAGAAGGAGTTAAAATTTTTACAGCCAGAGTTCATCAAGGAGTTGGAACTGAATACAGTGGGGAATC
TGTCCAAATTGGCAAAACTTGTACCTTGCATCAGCAAGATGAGAAATCTTCACAAACTCATGCTAGTACGCATCTTTGAA
AGGACCTATACACCCTCAGAGAAAAACGTCTCCAAGATCATTTCTCTGTTCCCTGAACTCAGGTATCTCCAGAATCTCAC
TATTGGTGATGTCTATTTTCTTAAAGACCACATGAATGAGTTACTCAGGTGTCTGGTGGCTCCCTTGGTGTCCCTGACTA
TCACTCTCTGCCAGATCTCTCAGTCAGATTTGGAGTCATTTGCCCAGCGTTGGAACTATGGTCAGCTTAAACATCTGTGT
TTGAAAGGTGTCTCTTTAACTGCATTGAATGTCACGCCTCTCAAATTTTTCTTAGAGAGTGTTGCAAACACTCTGCAGAC
TCTAGAATTAGAAGGCTGTAGGATGAGTGACTCTCACCTCAGTATCCTTCAGCCTGCCCTGACCCAATGCACCCAGCTCA
CTAGTTTCAATTTTTATGACAATAACATCTCCATGGATGCTCTGAAGGACCTTCTGCGTCACACTGTCAAACTGAGCCAG
CTGACCATGGAACTGTACCCTGCTCCAGTAGAGGTCTATAATGAGTGGGGTTATGTTCAGGTAGAGACATTTTCTCAGCT
TTGTGCTGAGCTCATGGACACACTCGTGGCTGTAAGGCAGCCCAAGTCAATCTGCTTTGGTACCTATTCCTGTTATGACT
GTGACACACGCTGTATCTATGAAAAGAAGGCCACATTTTGTGAATGCTTGGAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013324 possible_ortholog 1 retrogene
retro_dord_231,
Homo sapiens ENSG00000187545 ortholog_many2many 1 retrogene
retro_hsap_220,
Otolemur garnettii ENSOGAG00000000273 ortholog_many2many 2 retrogenes
retro_ogar_1100, retro_ogar_1238,
Ochotona princeps ENSOPRG00000009716 ortholog_many2many 1 retrogene
retro_opri_661,
Pan troglodytes ENSPTRG00000029629 ortholog_many2many 1 retrogene
retro_ptro_330,
Rattus norvegicus ENSRNOG00000048835 within_species_paralog 1 retrogene
retro_rnor_396,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1371 63.49 66.03
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Download FASTA sequences of all ENSRNOG00000042820 retrocopies