Parental gene:

Pramel7, ENSMUSG00000025839

Aliases:Pramel7, AA675346, C81180
Description:preferentially expressed antigen in melanoma like 7 [Source:MGI Symbol;Acc:MGI:2156391]
Organism:Mouse (Mus musculus)
Coordinates:2:87489086..87497093(-)


>ENSMUSG00000025839
ATGGTCAGTGCCCCACCCACACTCCAGGATCAGGCTTTCAGGAGCCTGGTGAGGAATGAAGTATTGACCGTCTCTGATGC
GGAGTGCCTAATAAGGGAATTCTTCCCACCTCTGTTCAAGGAGGCCAGCACTCAAAAAAAACCAAAGACAATTATGATCC
TGGTGGAGCACTGGCCCTACCCTTGCCTTCATGTTGGGTTGTTGATTGATAAACCCAACTTTCAGATCTTCCAGGCTATA
CTGGATGGAGTAGACACATGGCTGAAACGGAAGTATCGCCCCAGGATGGGAAGGCTTAAAAAGGTTGACTTCAGGGATGC
ACAGCATCATGCTTCCTTAGATATGCAGGATGAGAGAGAGGGTAGAGACTACTTAGTAGGAACTTTGCCTAAGAAGCAAA
TAGTGGAGGACCACTCAAGAACAAGGAAAGAGCGTTTGAAGCTGTTCCATGACCTTTCCTTTATGTCTTCTCTGCATGAG
GATAAACACCAAACACTGTTATTGGAGTGGGCAAAGGAAAGGACGAGTTTCCTGCATCTGTGCTGTGAGAAGTTGGAGAT
AGGAGCAGTAGAAGTGTCTAAGGTCAGGAATGTATTAAAATTTCTACAGCCAGAGCTCATCAAGGAGTTGAAACTGAATA
CAGTGGGGAATCTGTCCAAACTGGCAAAATTCGTACCTTTCATTAGAAAGATGAGAAACCTTCAGAAACTCATGCTAGTA
CGCACCTTTGGAACAAGGACTTTCACTCAAGAGGAGAAGCAGAACATCAGCAAGATCATTTCTCTGTTCTGCAAACTCAG
CTGTCTCCGGCATCTCACTATTGATGATGTCTATTTTCTCACAGATCAGATGAAAGAGTTGCTCAGGTGTCTGGAGGCCC
CATTGGTGTCCCTCAAGATCACCCTGTGCCAGCTCTCTCAGTCAGACTTGGAGTCATTTGCCCAGCGCTGGAACTACAGT
CAGCTTAAACATCTATGCTTGAGAGGTGTCACTTTAACTAACCTAGATGTCACGCCTCTAAGAGATTTCTTAAAGCGTGT
TGCAGCTAACCTGCAGACTCTGGACTTAGAAGACTGTAGGATGGATGATTCTCACTTCAGGACCCTTCTTCCTGCCCTGA
TCAAATGCACCCAGCTCACTAGCATCAATTTGTATGACAATGACATCTCCGAGGATGTCCTGGAGAACTTTTTGCACCGC
ACTACCAATCTGAGCCAGCTGACCACAGAAATGTATCCTGCTCCATCAGAGGTCTATAATGAGTCCAACTATGTTATAGT
AGAGATATTTATTCAGATTTGTTCTGAACTTATGAACAAACTCATGGAAGTCAGGCAGGCCAATTCAGTGTGCTTTGGTT
CCTCTTCCTGTTATGACTGTGATAATCGTTATTTATATGAAGATGATGGGGATGTCACACTTTGTTTGTGCCAGGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .06 RPM
SRP007412_kidney 0 .02 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013324 possible_ortholog 1 retrogene
retro_dord_231,
Homo sapiens ENSG00000187545 ortholog_many2many 1 retrogene
retro_hsap_220,
Otolemur garnettii ENSOGAG00000000273 ortholog_many2many 2 retrogenes
retro_ogar_1100, retro_ogar_1238,
Ochotona princeps ENSOPRG00000009716 ortholog_many2many 1 retrogene
retro_opri_661,
Pan troglodytes ENSPTRG00000029629 ortholog_many2many 1 retrogene
retro_ptro_330,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_557 84.42 99.16
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Download FASTA sequences of all ENSMUSG00000025839 retrocopies