Parental gene:

RPL37A, ENSPTRG00000029029

Aliases:None
Description:ribosomal protein L37a [Source:HGNC Symbol;Acc:10348]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:221534551..221539259(+)


>ENSPTRG00000029029
ATGGCCAAACGTACCAAGAAAGTCGGGATCGTCGGTAAATACGGGACCCGCTATGGGGCCTCCCTCCGGAAAATGGTGAA
GAAAATTGAAATCAGCCAGCACGCCAAGTACACTTGCTCTTTCTGTGGCAAAACCAAGATGAAGAGACGAGCTGTGGGGA
TCTGGCACTGTGGTTCCTGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACAATACCACTTCCGCTGTCACGGTAAAG
TCCGCCATCAGAAGACTGAAGGAGTTGAAAGACCAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 191 .31 RPM
SRP007412_cerebellum 217 .56 RPM
SRP007412_heart 180 .56 RPM
SRP007412_kidney 327 .47 RPM
SRP007412_liver 226 .68 RPM
SRP007412_testis 189 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003846 ortholog_one2one 9 retrogenes
retro_btau_1039, retro_btau_1070, retro_btau_1083, retro_btau_1240, retro_btau_1269, retro_btau_1366, retro_btau_1531, retro_btau_382, retro_btau_437,
Choloepus hoffmanni ENSCHOG00000004000 ortholog_one2one 14 retrogenes
retro_chof_1281, retro_chof_1338, retro_chof_1734, retro_chof_1744, retro_chof_1839, retro_chof_1866, retro_chof_1885, retro_chof_2338, retro_chof_2566, retro_chof_2645, retro_chof_298, retro_chof_731, retro_chof_814, retro_chof_885,
Felis catus ENSFCAG00000027010 ortholog_one2one 21 retrogenes
retro_fcat_1001, retro_fcat_1070, retro_fcat_1099, retro_fcat_1221, retro_fcat_1343, retro_fcat_1364, retro_fcat_1403, retro_fcat_149, retro_fcat_1644, retro_fcat_1662, retro_fcat_1704, retro_fcat_1738, retro_fcat_1756, retro_fcat_1850, retro_fcat_1918, retro_fcat_1940, retro_fcat_2018, retro_fcat_271, retro_fcat_595, retro_fcat_612, retro_fcat_633,
Homo sapiens ENSG00000197756 ortholog_one2one 6 retrogenes
retro_hsap_1086, retro_hsap_2482, retro_hsap_3542, retro_hsap_3773, retro_hsap_764, retro_hsap_926,
Gorilla gorilla ENSGGOG00000014827 ortholog_one2one 5 retrogenes
retro_ggor_1546, retro_ggor_2393, retro_ggor_2538, retro_ggor_2636, retro_ggor_633,
Latimeria chalumnae ENSLACG00000011578 ortholog_one2one 1 retrogene
retro_lcha_71,
Monodelphis domestica ENSMODG00000025485 ortholog_one2one 9 retrogenes
retro_mdom_1106, retro_mdom_1555, retro_mdom_1848, retro_mdom_1934, retro_mdom_350, retro_mdom_521, retro_mdom_771, retro_mdom_805, retro_mdom_975,
Mus musculus ENSMUSG00000046330 ortholog_one2one 18 retrogenes
retro_mmus_1036, retro_mmus_1764, retro_mmus_1979, retro_mmus_1993, retro_mmus_2070, retro_mmus_2114, retro_mmus_2594, retro_mmus_2768, retro_mmus_3010, retro_mmus_3130, retro_mmus_322, retro_mmus_3367, retro_mmus_350, retro_mmus_508, retro_mmus_577, retro_mmus_589, retro_mmus_699, retro_mmus_830,
Nomascus leucogenys ENSNLEG00000007276 ortholog_one2one 8 retrogenes
retro_nleu_129, retro_nleu_1621, retro_nleu_1926, retro_nleu_2271, retro_nleu_2623, retro_nleu_271, retro_nleu_396, retro_nleu_406,
Ochotona princeps ENSOPRG00000004436 ortholog_one2one 10 retrogenes
retro_opri_1043, retro_opri_1060, retro_opri_1188, retro_opri_260, retro_opri_318, retro_opri_430, retro_opri_471, retro_opri_864, retro_opri_870, retro_opri_994,
Petromyzon marinus ENSPMAG00000000001 ortholog_one2one 1 retrogene
retro_pmar_11,
Pongo abelii ENSPPYG00000025878 possible_ortholog 1 retrogene
retro_pabe_62,
Sarcophilus harrisii ENSSHAG00000013417 ortholog_one2one 10 retrogenes
retro_shar_133, retro_shar_197, retro_shar_246, retro_shar_322, retro_shar_339, retro_shar_460, retro_shar_466, retro_shar_605, retro_shar_611, retro_shar_642,
Tupaia belangeri ENSTBEG00000007409 ortholog_one2one 108 retrogenes
retro_tbel_1089, retro_tbel_1095, retro_tbel_1113, retro_tbel_1168, retro_tbel_1198, retro_tbel_1204, retro_tbel_1218, retro_tbel_1244, retro_tbel_1345, retro_tbel_1352, retro_tbel_141, retro_tbel_1434, retro_tbel_1466, retro_tbel_1471, retro_tbel_148, retro_tbel_1489, retro_tbel_1502, retro_tbel_151, retro_tbel_1534, retro_tbel_1683, retro_tbel_1714, retro_tbel_1807, retro_tbel_1835, retro_tbel_1838, retro_tbel_1922, retro_tbel_194, retro_tbel_1973, retro_tbel_1992, retro_tbel_1995, retro_tbel_2002, retro_tbel_2044, retro_tbel_2083, retro_tbel_209, retro_tbel_2101, retro_tbel_2178, retro_tbel_2190, retro_tbel_223, retro_tbel_2381, retro_tbel_2631, retro_tbel_2699, retro_tbel_2705, retro_tbel_2725, retro_tbel_2780, retro_tbel_2813, retro_tbel_2844, retro_tbel_285, retro_tbel_286, retro_tbel_2985, retro_tbel_3022, retro_tbel_3048, retro_tbel_3108, retro_tbel_3118, retro_tbel_3211, retro_tbel_3490, retro_tbel_350, retro_tbel_3565, retro_tbel_3593, retro_tbel_3632, retro_tbel_3641, retro_tbel_3651, retro_tbel_3757, retro_tbel_3784, retro_tbel_3837, retro_tbel_3901, retro_tbel_3910, retro_tbel_3912, retro_tbel_3916, retro_tbel_3919, retro_tbel_3955, retro_tbel_3969, retro_tbel_3970, retro_tbel_4055, retro_tbel_4098, retro_tbel_4099, retro_tbel_4117, retro_tbel_412, retro_tbel_4148, retro_tbel_4188, retro_tbel_420, retro_tbel_4244, retro_tbel_4382, retro_tbel_4452, retro_tbel_4522, retro_tbel_4524, retro_tbel_458, retro_tbel_4586, retro_tbel_4588, retro_tbel_4613, retro_tbel_4703, retro_tbel_472, retro_tbel_500, retro_tbel_566, retro_tbel_574, retro_tbel_583, retro_tbel_590, retro_tbel_594, retro_tbel_595, retro_tbel_622, retro_tbel_648, retro_tbel_681, retro_tbel_739, retro_tbel_767, retro_tbel_790, retro_tbel_834, retro_tbel_870, retro_tbel_893, retro_tbel_907, retro_tbel_998,
Tarsius syrichta ENSTSYG00000004258 possible_ortholog 11 retrogenes
retro_tsyr_1122, retro_tsyr_1704, retro_tsyr_1707, retro_tsyr_1831, retro_tsyr_1999, retro_tsyr_213, retro_tsyr_278, retro_tsyr_316, retro_tsyr_321, retro_tsyr_800, retro_tsyr_815,
Vicugna pacos ENSVPAG00000002529 ortholog_one2one 5 retrogenes
retro_vpac_208, retro_vpac_240, retro_vpac_271, retro_vpac_307, retro_vpac_479,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_535 84.04 100.00
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2. retro_ptro_642 87.06 92.39
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3. retro_ptro_738 78.26 100.00
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4. retro_ptro_1436 89.25 100.00
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5. retro_ptro_2408 70.21 100.00
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6. retro_ptro_2558 69.23 97.83
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Download FASTA sequences of all ENSPTRG00000029029 retrocopies